Return to main results Retrieve Phyre Job Id

Job DescriptionP77546
Confidence96.99%DateThu Jan 5 12:30:26 GMT 2012
Rank309Aligned Residues115
% Identity16%Templatec3dhwC_
PDB info PDB header:membrane protein/hydrolaseChain: C: PDB Molecule:methionine import atp-binding protein metn; PDBTitle: crystal structure of methionine importer metni
Resolution3.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   98.100.........110.........120.. .......130..... ....140.....
Predicted Secondary structure 










......................



..........
Query SS confidence 
























. . . . . . . . . . . . . . . . . . . . . .












. . . . . . . . . .









Query Sequence  MTGCTNFAFSGKPGTGKNHLAAAIG. . . . . . . . . . . . . . . . . . . . . . NRLLKDGQTVIVV. . . . . . . . . . TVADVMSALH
Query Conservation        


 
  







 


......................      
  
   ..........    
     
Alig confidence 
























......................












..........









Template Conservation 
  

   
 
 








  
 
      
 
   
                 
  
 
   
    

        
Template Sequence  VPAGQIYGVIGASGAGKSTLIRCVNLLERPTEGSVLVDGQELTTLSESELTKARRQIGMIFQHFNLLSSRTVFGNVALPL
Template Known Secondary structure 
SS
STTSSTTSS

STT
TT


SS



TTSB
Template Predicted Secondary structure 












































Template SS confidence 















































































   28.30.........40.........50.........60.........70.........80.........90.........100.......
 
   146...150.........160 .........170.........180.........190..
Predicted Secondary structure 


.................................










Query SS confidence 














. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .































Query Sequence  ASYDDGQSGEKFLRE. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . LCEVDLLVLDEIGIQRETKNEQVVLHQIVDRR
Query Conservation                 .................................     





 
           
  

  
Alig confidence 














.................................











.


















Template Conservation                   
    
          




 


 

 

   
 






.
  

      
   
  
Template Sequence  ELDNTPKDEVKRRVTELLSLVGLGDKHDSYPSNLSGGQKQRVAIARALASNPKVLLCDEA. TSALDPATTRSILELLKDI
Template Known Secondary structure  TTT

TTSTTTTTSS
BS


T

SSG.GGSS
Template Predicted Secondary structure 






























.




Template SS confidence 















































































   108.110.........120.........130.........140.........150.........160....... ..170.........180......
 
   193......200.........210...
Predicted Secondary structure 






Query SS confidence 




















Query Sequence  TASMRSVGMLTNLNYEAMKTL
Query Conservation      
  




     
   
Alig confidence 




















Template Conservation      
 


 


       
Template Sequence  NRRLGLTILLITHEMDVVKRI
Template Known Secondary structure 

BS
Template Predicted Secondary structure 





Template SS confidence 




















   187..190.........200.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions