 |
Job Description | P77546 | Confidence | 95.73% | Date | Thu Jan 5 12:30:26 GMT 2012 |
Rank | 465 | Aligned Residues | 48 |
% Identity | 21% | Template | c3dcbA_ |
PDB info |
PDB header:motor protein | Chain: A: PDB Molecule:kinesin-like protein nod; |
PDBTitle: crystal structure of the drosophila kinesin family member2 nod in complex with amppnp
|
Resolution | 2.50 Å |
|
  |   |
71 | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | |
. | . | . | . | . | . | . | . | . | 100 | . | . | |
. | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |
|
|
|
|
| . |
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
C | S | F | S | N | Y | Q | V | Q | N | E | G | Q | R | Y | A | L | S | Q | A | . |
K | S | I | A | D | E | L | M | T | G | C | T | . |
N | F | A | F | S | G | K | P | G | T | G | K | N | H | L | A |
Query Conservation |   |
  |
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . |   |   |   |   |   |   |   |   |   |   |   |   | . |   |
|
|
|   |
|   |   |
|
|
|
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|
|   |
|
|   |   |   |   |   |
|   |   |
|
|   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |
|   |   |
|   |
|
|
|   |
|
|
|
|
|
|   |
|
|
Template Sequence |   |
F | H | F | D | H | A | F | P | A | T | I | S | Q | D | E | M | Y | Q | A | L | I | L | P | L | V | D | K | L | L | E | G | F | Q | C | T | A | L | A | Y | G | Q | T | G | T | G | K | S | Y | S | M |
Template Known Secondary structure |   |
 |  |
| S |  |  |  |
| T | T |
|
|  |  |  |  |  |  |  |  | T |  |  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  |  |  | S | T | T | S | S |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
48 | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|