 |
Job Description | P77546 | Confidence | 96.61% | Date | Thu Jan 5 12:30:26 GMT 2012 |
Rank | 368 | Aligned Residues | 60 |
% Identity | 13% | Template | c2vl7A_ |
PDB info |
PDB header:unknown function | Chain: A: PDB Molecule:xpd; |
PDBTitle: structure of s. tokodaii xpd4
|
Resolution | 2.25 Å |
|
 |
  |   |
88 | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | |
. | 140 | . | . | . | . | . | . | . | . | . | 150 |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | Q | A | K | S | I | A | D | E | L | M | T | G | C | T | N | F | A | F | S | G | K | P | G | T | G | K | N | H | L | A | A | A | I | G | N | R | L | L | K | D | G | Q | T | V | I | V | V | T | V | A | . |
D | V | M | S | A | L | H | A | S | Y | D | D |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |
|   |   |
|
|
|
|
|
|
|
|   |
|
|
|   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   | . |   |
|   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |
|
|   |
|
|
|
|   |
|
|
|   |   |   |
|   |   | . | . | . |
|   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |
|   |   |
|   |   |   |
|   |   |   |
Template Sequence |   |
A | E | K | L | G | E | A | I | N | A | L | K | H | G | K | T | L | L | L | N | A | K | P | G | L | G | K | T | V | F | V | E | V | L | . |
. |
. |
G | M | Q | L | K | K | K | V | L | I | F | T | R | T | H | S | Q | L | D | S | I | Y | K | N | A | K | L |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |
|
| T | T | S |
|  |  |  |  |  |  |  |  | . | . | . |  |  |  |  | T |
|  |  |  |  |  |  | S |
|  |  |  |  |  |  |  |  |  |  |  | G | G |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  | . | . | . |  |  |  |
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
13 | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | |
|
|
. | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|