Job Description P77546 Confidence 98.65% Date Thu Jan 5 12:30:26 GMT 2012 Rank 73 Aligned Residues 159 % Identity 21% Template c2v1uA_ PDB info PDB header:replication Chain: A: PDB Molecule:cell division control protein 6 homolog; PDBTitle: structure of the aeropyrum pernix orc1 protein in complex2 with dna Resolution 3.10 Å

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		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.			.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130							.	.	.	.	.	.	.	.							.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																						.	.																												.	.	.	.	.	.									.	.	.	.	.	.
Query SS confidence																						.	.																												.	.	.	.	.	.									.	.	.	.	.	.
Query Sequence		R	Y	A	L	S	Q	A	K	S	I	A	D	E	L	M	T	G	C	T	N	.	.	F	A	F	S	G	K	P	G	T	G	K	N	H	L	A	A	A	I	G	N	R	L	L	K	D	G	Q	.	.	.	.	.	.	T	V	I	V	V	T	V	A	.	.	.	.	.	.	D	V	M	S	A	L	H	A	S	Y	D
Query Conservation																						.	.																												.	.	.	.	.	.									.	.	.	.	.	.
Alig confidence																						.	.																												.	.	.	.	.	.									.	.	.	.	.	.
Template Conservation
Template Sequence		E	A	E	L	R	R	L	A	E	V	L	A	P	A	L	R	G	E	K	P	S	N	A	L	L	Y	G	L	T	G	T	G	K	T	A	V	A	R	L	V	L	R	R	L	E	A	R	A	S	S	L	G	V	L	V	K	P	I	Y	V	N	A	R	H	R	E	T	P	Y	R	V	A	S	A	I	A	E	A	V	G
Template Known Secondary structure											T	T	G	G	G	T	S	S										B		T	T	S	S																				T										T	T	T	S		S													S
Template Predicted Secondary structure
Template SS confidence
		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
		150	.	.	.	.													.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence							.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	G	Q	S	G	.	.	.	.	.	.	.	.	.	.	.	.	E	K	F	L	R	E	L	C	E	V	D	L	L	V	L	D	E	I	G	I	Q	R	E	T	K	N	E	Q	V	V	L	H	Q	I	V	D	R	R	T	A	S	M	R	S	V	G	M	L	T	N	L	N	Y	E	A	M	K	T	L	L	G	E	R
Query Conservation							.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.																																							.																.	.
Template Conservation																																																									.																.	.
Template Sequence		V	R	V	P	F	T	G	L	S	V	G	E	V	Y	E	R	L	V	K	R	L	S	R	L	R	G	I	Y	I	I	V	L	D	E	I	D	F	L	P	K	R	P	G	G	Q	D	L	L	Y	R	I	T	R	I	N	.	Q	E	L	V	S	L	V	G	I	T	N	S	L	G	F	.	.	V	E	N	L	E	P	R
Template Known Secondary structure						S	S																T	T	S		S								T	T	T					S	T	T											G	G	.	G										S		S	T	T	.	.	S	S	S	S
Template Predicted Secondary structure																																																									.																.	.
Template SS confidence
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.		.	.	.	.	.	.	.	.	180	.	.	.	.	.	.			.	.	.	190	.	.	.
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	M	D	R	M	T	M	N	G	G	R	W	V	N	F	N	W	E	S	W	R	P	N	V	V	Q	P	G	I
Query Conservation
Alig confidence								.
Template Conservation								.
Template Sequence		V	K	S	S	L	G	.	E	V	E	L	V	F	P	P	Y	T	A	P	Q	L	R	D	I	L	E	T	R	A
Template Known Secondary structure				T	T	T	T	.	S					B
Template Predicted Secondary structure								.
Template SS confidence
		199	200	.	.	.	.		.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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