Job Description P77546 Confidence 97.30% Date Thu Jan 5 12:30:26 GMT 2012 Rank 236 Aligned Residues 101 % Identity 16% Template c2qeqA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:flavivirin protease ns3 catalytic subunit; PDBTitle: crystal structure of kunjin virus ns3 helicase Resolution 3.10 Å

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		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.		.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.		.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.																	.	.	.	.	.	.	.
Predicted Secondary structure																		.																			.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.
Query SS confidence																		.																			.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.
Query Sequence		C	T	N	F	A	F	S	G	K	P	G	T	G	K	N	H	.	L	A	A	A	I	G	N	R	L	L	K	D	G	Q	T	V	I	V	.	V	T	V	A	D	V	M	S	A	L	H	A	S	Y	D	D	G	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	G	E	K	F	L	R	.	.	.
Query Conservation																		.																			.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.
Alig confidence																		.																			.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.
Template Conservation
Template Sequence		K	Q	I	T	V	L	D	L	H	P	G	A	G	K	T	R	R	I	L	P	Q	I	I	K	E	A	I	N	R	R	L	R	T	A	V	L	A	P	T	R	V	V	A	A	E	M	A	E	A	L	R	G	L	P	I	R	Y	Q	T	S	A	N	G	N	E	I	V	D	V	M	C	H	A	T	L	T	H	R	L	M
Template Known Secondary structure											S	S	T	T	T	T	T	T												T	T								S	S												T	T	S											S
Template Predicted Secondary structure
Template SS confidence
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
					160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	E	L	C	E	V	D	L	L	V	L	D	E	I	G	I	Q	R	E	T	K	N	E	Q	V	V	L	H	Q	I	V	D	R	R	T	A	S	M	R	S	V	G	M	L	T
Query Conservation		.	.	.
Alig confidence		.	.	.													.	.
Template Conservation																	.	.
Template Sequence		S	P	H	R	V	P	N	Y	N	L	F	V	M	D	E	.	.	A	H	F	T	D	P	A	S	I	A	A	R	G	Y	I	S	T	R	V	E	L	G	E	A	A	A	I	F	M	T
Template Known Secondary structure		S	S	S						S					S	S	.	.	T	T																			T	T	S
Template Predicted Secondary structure																	.	.
Template SS confidence
		272	.	.	.	.	.	.	.	280	.	.	.	.	.	.			.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions