Job Description P77546 Confidence 98.52% Date Thu Jan 5 12:30:26 GMT 2012 Rank 83 Aligned Residues 162 % Identity 14% Template c2px0D_ PDB info PDB header:biosynthetic protein Chain: D: PDB Molecule:flagellar biosynthesis protein flhf; PDBTitle: crystal structure of flhf complexed with gmppnp/mg(2+) Resolution 3.00 Å

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		53	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.						.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.										.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.																									.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.																									.	.	.	.	.	.	.	.	.
Query Sequence		L	R	V	E	K	I	L	N	R	S	G	I	Q	P	L	H	R	K	C	S	F	S	.	.	.	.	.	N	Y	Q	V	Q	N	E	G	Q	R	Y	A	L	S	Q	A	K	S	I	A	D	E	L	M	.	.	.	.	.	.	.	.	.	T	G	C	T	N	F	A	F	S	G	K	P	G	T	G	K	N	H	L	A
Query Conservation																								.	.	.	.	.																									.	.	.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.																									.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	K	A	E	K	L	L	Q	E	T	G	I	K	E	S	T	K	T	N	T	L	K	K	L	L	R	F	S	V	E	A	G	G	L	T	E	E	N	V	V	G	K	L	Q	E	I	L	C	D	M	L	P	S	A	D	K	W	Q	E	P	I	H	S	K	Y	I	V	L	F	G	S	T	G	A	G	K	T	T	T	L
Template Known Secondary structure											S	S														T					S	S	S				S	S	S												T	S			S	T	T	S				S		S	S	B							S	S	S
Template Predicted Secondary structure
Template SS confidence
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
		119	120	.	.		.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140					.	.	.	.	.	.	.											.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
Predicted Secondary structure						.																			.	.	.	.								.	.	.	.	.	.	.	.	.	.
Query SS confidence						.																			.	.	.	.								.	.	.	.	.	.	.	.	.	.
Query Sequence		A	A	I	G	.	N	R	L	L	K	D	G	Q	T	V	I	V	V	T	V	A	D	V	.	.	.	.	M	S	A	L	H	A	S	.	.	.	.	.	.	.	.	.	.	Y	D	D	G	Q	S	G	E	K	F	L	R	E	L	C	E	V	D	L	L	V	L	D	E	I	G	I	Q	R	E	T	K	N	E	Q	V
Query Conservation						.																			.	.	.	.								.	.	.	.	.	.	.	.	.	.
Alig confidence						.																			.	.	.	.								.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	K	L	A	A	I	S	M	L	E	K	H	K	K	I	A	F	I	T	T	D	T	Y	R	I	A	A	V	E	Q	L	K	T	Y	A	E	L	L	Q	A	P	L	E	V	C	Y	T	K	E	E	F	Q	Q	A	K	E	L	F	S	E	Y	D	H	V	F	V	D	T	A	G	R	N	F	K	D	P	Q	Y	I	D
Template Known Secondary structure											T	S												S	S	T	T	T	T					T					T	T							S	S										T	T	T	T	S	S												S	S	G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	H	Q	I	V	D	R	R	T	A	S	M	R	S	V	G	M	L	T	N	L	N	Y	E	A	M	K	T	L	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	L	K	E	T	I	P	F	E	S	S	I	Q	S	F	L	V	L	S	A	T	A	K	Y	E	D	M	K	H	I	V
Template Known Secondary structure							S				T	T	B								T	T	S						T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		273	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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