Job Description P77546 Confidence 97.74% Date Thu Jan 5 12:30:26 GMT 2012 Rank 158 Aligned Residues 122 % Identity 21% Template c2p6uA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:afuhel308 helicase; PDBTitle: apo structure of the hel308 superfamily 2 helicase Resolution 3.14 Å

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		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.		.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure																											.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																											.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	D	E	L	M	T	G	C	T	N	F	A	F	S	G	K	P	G	T	G	K	N	H	L	A	.	A	A	I	G	N	R	L	L	K	D	G	Q	T	V	I	V	V	T	V	A	D	V	M	S	A	L	H	A	S	Y	D	D	G	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																											.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																											.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	V	E	K	V	F	S	G	K	N	L	L	L	A	M	P	T	A	A	G	K	T	L	L	A	E	M	A	M	V	R	E	A	I	K	G	G	K	S	L	Y	V	V	P	L	R	A	L	A	G	E	K	Y	E	S	F	K	K	W	E	K	I	G	L	R	I	G	I	S	T	G	D	Y	E	S	R	D	E	H	L
Template Known Secondary structure							T	T		S							S	S																			T								S	S												G	G	G	G	T	T	T								S			S				T	T	G
Template Predicted Secondary structure
Template SS confidence
		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
										153	.	.	.	.	.	.	160								.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.				.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.									.	.	.	.	.	.	.																																										.	.	.
Query SS confidence		.	.	.	.	.	.	.	.									.	.	.	.	.	.	.																																										.	.	.
Query Sequence		.	.	.	.	.	.	.	.	S	G	E	K	F	L	R	E	.	.	.	.	.	.	.	L	C	E	V	D	L	L	V	L	D	E	I	G	I	Q	R	E	T	K	N	E	Q	V	V	L	H	Q	I	V	D	R	R	T	A	S	M	R	S	V	G	M	.	.	.	L	T	N	L	N	Y	E	A	M	K	T	L	L
Query Conservation		.	.	.	.	.	.	.	.									.	.	.	.	.	.	.																																										.	.	.
Alig confidence		.	.	.	.	.	.	.	.									.	.	.	.	.	.	.																																										.	.	.
Template Conservation
Template Sequence		G	D	C	D	I	I	V	T	T	S	E	K	A	D	S	L	I	R	N	R	A	S	W	I	K	A	V	S	C	L	V	V	D	E	I	H	L	L	D	S	E	K	R	G	A	T	L	E	I	L	V	T	K	M	R	R	M	N	K	A	L	R	V	I	G	L	S	A	T	A	P	N	V	T	E	I	A	E	W	L
Template Known Secondary structure		G	G		S															T	T		S	S	G	G	G							T	T	G	G	G	G	G		T	T	T																T	T											T	T
Template Predicted Secondary structure
Template SS confidence
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
		215
Predicted Secondary structure
Query SS confidence
Query Sequence		G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D
Template Known Secondary structure		T
Template Predicted Secondary structure
Template SS confidence
		193

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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