Job Description P77546 Confidence 99.87% Date Thu Jan 5 12:30:26 GMT 2012 Rank 6 Aligned Residues 140 % Identity 19% Template c2kjqA_ PDB info PDB header:replication Chain: A: PDB Molecule:dnaa-related protein; PDBTitle: solution structure of protein nmb1076 from neisseria meningitidis.2 northeast structural genomics consortium target mr101b. Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	L	H	R	K	C	S	F	S	N	Y	Q	V	Q	N	E	G	Q	R	Y	A	L	S	Q	A	K	S	I	A	D	E	L	M	T	G	C	T	N	F	A	F	S	G	K	P	G	T	G	K	N	H	L	A	A	A	I	G	N	R	L	L	K	D	G	Q	T	V	I	V	V	T	V	A	D	V	M	S	A	L	H
Query Conservation
Alig confidence																									.	.	.	.	.	.	.	.																																													.	.	.	.	.
Template Conservation																									.	.	.	.	.	.	.	.																																													.	.	.	.	.
Template Sequence		S	H	M	D	Y	P	S	F	D	K	F	L	G	T	E	N	A	E	L	V	Y	V	L	.	.	.	.	.	.	.	.	R	H	K	H	G	Q	F	I	Y	V	W	G	E	E	G	A	G	K	S	H	L	L	Q	A	W	V	A	Q	A	L	E	A	G	K	N	A	A	Y	I	D	A	A	S	M	.	.	.	.	.
Template Known Secondary structure														S			T								.	.	.	.	.	.	.	.						S						S	S	S	T	T	T	T													T	T	T								T	T	T	S	.	.	.	.	.
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.																																													.	.	.	.	.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.									.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	S	Y	D	D	G	Q	S	G	E	K	F	L	R	E	L	C	E	V	D	L	L	V	L	D	E	I	G	I	Q	R	E	T	K	N	E	Q	V	V	L	H	Q	I	V	D	R	R	T	A	S	M	R	S	V	G	M	L	T	N	L	N	Y	E	A	M	K	T	L	L	G	E	R	I	M	D	R	M	T	M	N
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.																		.	.																																							.										.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.																		.	.																																							.										.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	P	L	T	D	A	A	F	E	A	E	Y	L	A	V	D	Q	V	.	.	E	K	L	G	N	E	E	Q	A	L	L	F	S	I	F	N	R	F	R	N	S	G	K	G	F	L	L	L	G	S	E	Y	T	P	Q	Q	L	V	.	I	R	E	D	L	R	T	R	M	.	.	A
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.				G	G	G	G	G		S						S	T	.	.	T				S																	T									S	S		T	T	T	S	S	.									G	.	.	G
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.																		.	.																																							.										.	.
Template SS confidence
												76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.			.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130		.	.	.	.	.	.	.	.	.			140
		226	.	.	.	230	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	G	R	W	V	N	F	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	C	L	V	Y	E	V	K
Template Known Secondary structure		G	S
Template Predicted Secondary structure
Template SS confidence
		141	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions