Return to main results Retrieve Phyre Job Id

Job DescriptionP77546
Confidence95.24%DateThu Jan 5 12:30:26 GMT 2012
Rank495Aligned Residues79
% Identity15%Templatec2hxyC_
PDB info PDB header:hydrolaseChain: C: PDB Molecule:probable atp-dependent rna helicase ddx48; PDBTitle: crystal structure of human apo-eif4aiii
Resolution3.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   72.......80...... ...90.........100.........110.........120...... ...130.........140
Predicted Secondary structure 





.......










....



Query SS confidence 














. . . . . . .







































. . . .













Query Sequence  SFSNYQVQNEGQRYA. . . . . . . LSQAKSIADELMTGCTNFAFSGKPGTGKNHLAAAIGNRLL. . . . KDGQTVIVVTVADV
Query Conservation 

 
           .......                 


 
  







 


    ....  
  
       
Alig confidence 














.......







































....













Template Conservation 

  
 
   
   
   
       
  

  
  
   

 








   
  
  
         


 
   
Template Sequence  TFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTREL
Template Known Secondary structure 
SGGGT

T

S

T



SSS
TTS

TTS
S


S
Template Predicted Secondary structure 




























Template SS confidence 















































































   3940.........50.........60.........70.........80.........90.........100.........110........
 
   141........150
Predicted Secondary structure 
Query SS confidence 









Query Sequence  MSALHASYDD
Query Conservation            
Alig confidence 









Template Conservation    
    
  
Template Sequence  AVQIQKGLLA
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 









   119120........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions