Job Description P77546 Confidence 96.82% Date Thu Jan 5 12:30:26 GMT 2012 Rank 337 Aligned Residues 111 % Identity 15% Template c2gedB_ PDB info PDB header:protein transport, signaling protein Chain: B: PDB Molecule:signal recognition particle receptor beta PDBTitle: signal recognition particle receptor beta-subunit in2 nucleotide-free dimerized form Resolution 2.20 Å

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		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.				.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure																																																																			.	.	.
Query SS confidence																																																																			.	.	.
Query Sequence		T	G	C	T	N	F	A	F	S	G	K	P	G	T	G	K	N	H	L	A	A	A	I	G	N	R	L	L	K	D	G	Q	T	V	I	V	V	T	V	A	D	V	M	S	A	L	H	A	S	Y	D	D	G	Q	S	G	E	K	F	L	R	E	L	C	E	.	.	.	V	D	L	L	V	L	D	E	I	G	I	Q
Query Conservation																																																																			.	.	.
Alig confidence																													.	.												.	.	.	.	.	.	.																			.	.	.
Template Conservation																													.	.												.	.	.	.	.	.	.
Template Sequence		L	Y	Q	P	S	I	I	I	A	G	P	Q	N	S	G	K	T	S	L	L	T	L	L	T	A	D	Y	.	.	D	G	S	G	V	T	L	V	D	F	P	.	.	.	.	.	.	.	G	H	V	K	L	R	Y	K	L	S	D	Y	L	K	T	R	A	K	F	V	K	G	L	I	F	M	V	D	S	T	V	D	P
Template Known Secondary structure													T	T	S	S													.	.			T	T		S				T	T	.	.	.	.	.	.	.	T					S											G	G	G										S	S
Template Predicted Secondary structure																													.	.												.	.	.	.	.	.	.
Template SS confidence
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270			.	.	.	.	.	.	.	.	.	280	.								.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
		176	.	.	.	180	.	.	.	.	.	.	.	.	.				190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.								.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure																.	.	.																	.	.	.	.	.	.	.
Query SS confidence																.	.	.																	.	.	.	.	.	.	.
Query Sequence		R	E	T	K	N	E	Q	V	V	L	H	Q	I	V	.	.	.	D	R	R	T	A	S	M	R	S	V	G	M	L	T	N	L	.	.	.	.	.	.	.	N	Y	E	A	M	K	T	L	L	G	E	R	I
Query Conservation																.	.	.																	.	.	.	.	.	.	.
Alig confidence																.	.	.																	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	K	L	T	T	T	A	E	F	L	V	D	I	L	S	I	T	E	S	S	C	E	N	G	I	D	I	L	I	A	C	N	K	S	E	L	F	T	A	R	P	P	S	K	I	K	D	A	L	E	S	E	I
Template Known Secondary structure																						S	T	T											T	T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions