Job Description P77546 Confidence 96.72% Date Thu Jan 5 12:30:26 GMT 2012 Rank 353 Aligned Residues 92 % Identity 22% Template c2fwrA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:dna repair protein rad25; PDBTitle: structure of archaeoglobus fulgidis xpb Resolution 2.60 Å

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		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure																																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	S	I	A	D	E	L	M	T	G	C	T	N	F	A	F	S	G	K	P	G	T	G	K	N	H	L	A	A	A	I	G	N	R	L	L	K	D	G	Q	T	V	I	V	V	T	V	A	D	V	M	S	A	L	H	A	S	Y	D	D	G	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																					.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																					.	.
Template Sequence		Q	E	K	A	L	E	R	W	L	V	D	K	R	G	C	I	V	L	P	T	G	S	G	K	T	H	V	A	M	A	A	I	N	E	L	.	.	S	T	P	T	L	I	V	V	P	T	L	A	L	A	E	Q	W	K	E	R	L	G	I	F	G	E	E	Y	V	G	E	F	S	G	R	I	K	E	L	K	P	L	T
Template Known Secondary structure										T	T	T	T								T	T	S														.	.		S							S	S											G	G	G	G		G	G	G				B	S	S	S		B				S
Template Predicted Secondary structure																																					.	.
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.			.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
								153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	S	G	E	K	F	L	R	E	L	C	E	V	D	L	L	V	L	D	E	I	G	I	Q	R	E	T	K	N	E	Q	V	V
Query Conservation		.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.
Template Conservation
Template Sequence		V	S	T	Y	D	S	A	Y	V	N	A	E	K	L	G	N	R	F	M	L	L	I	F	D	E	V	H	H	L	P	A	E	S	Y	V	Q	I	A
Template Known Secondary structure											T					T	T	T		S						T	G	G	G	T	T	S	T	T	T
Template Predicted Secondary structure
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions