 |
| Job Description | P77546 | | Confidence | 95.24% | Date | Thu Jan 5 12:30:26 GMT 2012 |
| Rank | 496 | Aligned Residues | 68 |
| % Identity | 16% | Template | c1xtkA_ |
| PDB info |
PDB header:gene regulation | Chain: A: PDB Molecule:probable atp-dependent rna helicase p47; |
PDBTitle: structure of decd to dead mutation of human uap56
|
| Resolution | 2.40 Å |
|
| | |
75 | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | |
|
|
|
. | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 |
| Predicted Secondary structure | |
 |
|
|
|
|
| | | | | | | | | | | | | | | | | |
|
|
|
|
|
|  | | |  |
|
|
|
|
| | | | | | | | | | | | | | | |
|
|
|
| . | . | . | . | | | | | | | | | | | | | | | | | | |
|
| Query SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence | |
N | Y | Q | V | Q | N | E | G | Q | R | Y | A | L | S | Q | A | K | S | I | A | D | E | L | M | T | G | C | T | N | F | A | F | S | G | K | P | G | T | G | K | N | H | L | A | A | A | I | G | N | R | L | L | K | D | G | Q | T | . |
. |
. |
. |
V | I | V | V | T | V | A | D | V | M | S | A | L | H | A | S | Y | D | D |
| Query Conservation | |
| | | | | | | | | | | | | | | | | | | | | | | | | | | | |
|
|
| |
| | |
|
|
|
|
|
|
|
| |
|
|
| | | | | | |
| | | . | . | . | . |
| | | | | | | |
| | | | | | | | | | |
| Alig confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation | |
| | | | | | | |
| | |
|
| | |
|
| . | . | . | . | . | . | . | . | | | | |
|
|
| |
|
|
|
|
|
|
|
|
| | | |
| |
|
| | |
| | | | | | | | | |
|
|
| |
| | | |
| | |
| | | | | | | |
| Template Sequence | |
G | F | E | H | P | S | E | V | Q | H | E | C | I | P | Q | A | I | . |
. |
. |
. |
. |
. |
. |
. |
L | G | M | D | V | L | C | Q | A | K | S | G | M | G | K | T | A | V | F | V | L | A | T | L | Q | Q | L | E | P | V | T | G | Q | V | S | V | L | V | M | C | H | T | R | E | L | A | F | Q | I | S | K | E | Y | E | R |
| Template Known Secondary structure | |
T |
|
|
|
|
| | | | | | | | | | | | . | . | . | . | . | . | . | . | T | T |
|
| | | | |
|
| S | S | T | T | | | | | | | | | | | | |
|
|
|
| T | T |
|
|
| | | | |
| S |
| | | | | | | | | | | | | |
| Template Predicted Secondary structure | |
|
|
|
|
|
| | | | | | | | | | | | . | . | . | . | . | . | . | . |
|
|
|
| | | | |
|
|
|
|
|
| | | | | | | | | | | | | | |
|
|
|
|
|
| | | | | | |
| | | | | | | | | | | | | | |
| Template SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| | |
64 | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | |
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . |
| |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
| |
|
|
|
