Job Description P77546 Confidence 98.01% Date Thu Jan 5 12:30:26 GMT 2012 Rank 124 Aligned Residues 180 % Identity 14% Template c1w5sB_ PDB info PDB header:replication Chain: B: PDB Molecule:origin recognition complex subunit 2 orc2; PDBTitle: structure of the aeropyrum pernix orc2 protein (adp form) Resolution 2.4 Å

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		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.				.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.					.	.	130	.	.	.	.	.	.	.
Predicted Secondary structure																																									.	.	.																									.	.	.	.
Query SS confidence																																									.	.	.																									.	.	.	.
Query Sequence		Q	P	L	H	R	K	C	S	F	S	N	Y	Q	V	Q	N	E	G	Q	R	Y	A	L	S	Q	A	K	S	I	A	D	E	L	M	T	G	C	T	N	.	.	.	F	A	F	S	G	K	P	G	T	G	K	N	H	L	A	A	A	I	G	N	R	L	L	K	.	.	.	.	D	G	Q	T	V	I	V	V	T	V
Query Conservation																																									.	.	.																									.	.	.	.
Alig confidence																																									.	.	.																									.	.	.	.
Template Conservation
Template Sequence		R	V	F	D	E	N	Y	I	P	P	E	L	R	V	R	R	G	E	A	E	A	L	A	R	I	Y	L	N	R	L	L	S	G	A	G	L	S	D	V	N	M	I	Y	G	S	I	G	R	V	G	I	G	K	T	T	L	A	K	F	T	V	K	R	V	S	E	A	A	A	K	E	G	L	T	V	K	Q	A	Y	V
Template Known Secondary structure		G	G	G	S	T	T				S	S		S	S	S	S																	T													T	T			S	S	S																			T	T
Template Predicted Secondary structure
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
		138									.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.													.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.		.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
Predicted Secondary structure			.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.																					.
Query SS confidence			.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.																					.
Query Sequence		A	.	.	.	.	.	.	.	.	D	V	M	S	A	L	H	A	S	Y	D	D	G	Q	S	G	.	.	.	.	.	.	.	.	.	.	.	.	E	K	F	L	R	E	L	C	E	V	D	L	L	V	L	D	E	I	G	I	.	Q	R	E	T	K	N	E	Q	V	V	L	H	Q	I	V	D	R	R	T	A	S	M
Query Conservation			.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.																					.
Alig confidence			.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.																					.
Template Conservation
Template Sequence		N	A	F	N	A	P	N	L	Y	T	I	L	S	L	I	V	R	Q	T	G	Y	P	I	Q	V	R	G	A	P	A	L	D	I	L	K	A	L	V	D	N	L	Y	V	E	N	H	Y	L	L	V	I	L	D	E	F	Q	S	M	L	S	S	P	R	I	A	A	E	D	L	Y	T	L	L	R	V	H	E	E	I	P
Template Known Secondary structure			G	G	G			S													T						T	T																		T									S	T					S		T	T	S										T					S
Template Predicted Secondary structure
Template SS confidence
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
		197									.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
Predicted Secondary structure			.	.	.	.	.	.	.	.
Query SS confidence			.	.	.	.	.	.	.	.
Query Sequence		R	.	.	.	.	.	.	.	.	S	V	G	M	L	T	N	L	N	Y	E	A	M	K	T	L	L	G	E	R	I	M	D	R	M	T	M	N	G	G	R	W	V	N	F	N	W	E	S	W	R	P	N	V	V	Q	P	G	I
Query Conservation			.	.	.	.	.	.	.	.
Alig confidence			.	.	.	.	.	.	.	.																										.	.
Template Conservation																																				.	.
Template Sequence		S	R	D	G	V	N	R	I	G	F	L	L	V	A	S	D	V	R	A	L	S	Y	M	R	E	K	I	P	Q	V	E	S	Q	I	.	.	G	F	K	L	H	L	P	A	Y	K	S	R	E	L	Y	T	I	L	E	Q	R	A
Template Known Secondary structure			T	T	S													T															T	T		.	.	S
Template Predicted Secondary structure																																				.	.
Template SS confidence
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.			.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions