Job Description P77546 Confidence 98.74% Date Thu Jan 5 12:30:26 GMT 2012 Rank 65 Aligned Residues 142 % Identity 17% Template c1sxjC_ PDB info PDB header:replication Chain: C: PDB Molecule:activator 1 40 kda subunit; PDBTitle: crystal structure of the eukaryotic clamp loader2 (replication factor c, rfc) bound to the dna sliding clamp3 (proliferating cell nuclear antigen, pcna) Resolution 2.85 Å

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		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	L	H	R	K	C	S	F	S	N	Y	Q	V	Q	N	E	G	Q	R	Y	A	L	S	Q	A	K	S	I	A	D	E	L	M	T	G	C	T	N	F	A	F	S	G	K	P	G	T	G	K	N	H	L	A	A	A	I	G	N	R	L	L	K	D	G	Q	T	V	I	V	V	T	V	A	D	V	M	S	A	L	H
Query Conservation
Alig confidence																												.	.	.	.	.	.
Template Conservation																												.	.	.	.	.	.
Template Sequence		E	K	Y	R	P	E	T	L	D	E	V	Y	G	Q	N	E	V	I	T	T	V	R	K	F	V	D	.	.	.	.	.	.	E	G	K	L	P	H	L	L	F	Y	G	P	P	G	T	G	K	T	S	T	I	V	A	L	A	R	E	I	Y	G	K	N	Y	S	N	M	V	L	E	L	N	A	S	D	D	R	G	I
Template Known Secondary structure				T			S	S	G	G	G			S														.	.	.	.	.	.	T	T										S	S	S	S	S														T	T	S										T	T	S			S
Template Predicted Secondary structure																												.	.	.	.	.	.
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.							.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.			.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.
Query SS confidence																			.	.
Query Sequence		A	S	Y	D	D	G	Q	S	G	E	K	F	L	R	E	L	C	.	.	E	V	D	L	L	V	L	D	E	I	G	I	Q	R	E	T	K	N	E	Q	V	V	L	H	Q	I	V	D	R	R	T	A	S	M	R	S	V	G	M	L	T	N	L	N	Y	E	A	M	K	T	L	L	G	E	R
Query Conservation																			.	.
Alig confidence																			.	.															.	.															.	.
Template Conservation																																			.	.															.	.
Template Sequence		D	V	V	R	N	Q	I	K	D	F	A	S	T	R	Q	I	F	S	K	G	F	K	L	I	I	L	D	E	A	D	A	M	T	.	.	N	A	A	Q	N	A	L	R	R	V	I	E	R	Y	.	.	T	K	N	T	R	F	C	V	L	A	N	Y	A	H	K	L	T	P	A	L	L	S	Q
Template Known Secondary structure						T								S			S	S	S		S							T	T	G	G	G	S		.	.														T	.	.	T	T	T								S		G	G	G	S						T	T
Template Predicted Secondary structure																																			.	.															.	.
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.			.	.	.	.	.	.	130	.	.	.	.	.	.	.			.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions