Job Description P77546 Confidence 95.91% Date Thu Jan 5 12:30:26 GMT 2012 Rank 453 Aligned Residues 79 % Identity 16% Template c1s2mA_ PDB info PDB header:rna binding protein Chain: A: PDB Molecule:putative atp-dependent rna helicase dhh1; PDBTitle: crystal structure of the dead box protein dhh1p Resolution 2.10 Å

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		72	.	.	.	.	.	.	.	80	.	.	.	.	.								.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.					130	.	.	.	.	.	.	.	.	.	140
Predicted Secondary structure																.	.	.	.	.	.	.																																													.	.	.	.
Query SS confidence																.	.	.	.	.	.	.																																													.	.	.	.
Query Sequence		S	F	S	N	Y	Q	V	Q	N	E	G	Q	R	Y	.	.	.	.	.	.	.	A	L	S	Q	A	K	S	I	A	D	E	L	M	T	G	C	T	N	F	A	F	S	G	K	P	G	T	G	K	N	H	L	A	A	A	I	G	N	R	L	L	K	D	G	.	.	.	.	Q	T	V	I	V	V	T	V	A	D	V
Query Conservation																.	.	.	.	.	.	.																																													.	.	.	.
Alig confidence																.	.	.	.	.	.	.																																													.	.	.	.
Template Conservation
Template Sequence		T	F	E	D	F	Y	L	K	R	E	L	L	M	G	I	F	E	A	G	F	E	K	P	S	P	I	Q	E	E	A	I	P	V	A	I	T	G	R	D	I	L	A	R	A	K	N	G	T	G	K	T	A	A	F	V	I	P	T	L	E	K	V	K	P	K	L	N	K	I	Q	A	L	I	M	V	P	T	R	E	L
Template Known Secondary structure			G	G	G	G													T	T			S															T									T	T	S																T	T	S		S								S	S
Template Predicted Secondary structure
Template SS confidence
		47	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
		141	.	.	.	.	.	.	.	.	150
Predicted Secondary structure
Query SS confidence
Query Sequence		M	S	A	L	H	A	S	Y	D	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	L	Q	T	S	Q	V	V	R	T
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		127	.	.	130	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions