Job Description P77546 Confidence 99.25% Date Thu Jan 5 12:30:26 GMT 2012 Rank 33 Aligned Residues 159 % Identity 15% Template c1nsfA_ PDB info PDB header:protein transport Chain: A: PDB Molecule:n-ethylmaleimide sensitive factor; PDBTitle: d2 hexamerization domain of n-ethylmaleimide sensitive factor (nsf) Resolution 1.90 Å

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		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.					.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																															.	.	.	.
Query SS confidence																															.	.	.	.
Query Sequence		S	N	Y	Q	V	Q	N	E	G	Q	R	Y	A	L	S	Q	A	K	S	I	A	D	E	L	M	T	G	C	T	.	.	.	.	N	F	A	F	S	G	K	P	G	T	G	K	N	H	L	A	A	A	I	G	N	R	L	L	K	D	G	Q	T	V	I	V	V	T	V	A	D	V	M	S	A	L	H	A	S	Y	D
Query Conservation																															.	.	.	.
Alig confidence																															.	.	.	.																								.	.	.
Template Conservation																																																										.	.	.
Template Sequence		N	G	I	I	K	W	G	D	P	V	T	R	V	L	D	D	G	E	L	L	V	Q	Q	T	K	N	S	D	R	T	P	L	V	S	V	L	L	E	G	P	P	H	S	G	K	T	A	L	A	A	K	I	A	E	E	S	.	.	.	N	F	P	F	I	K	I	C	S	P	D	K	M	I	G	F	S	E	T	A	K
Template Known Secondary structure		T						S																					S	S		S									S	T	T	S	S													.	.	.			S							G	G	G	S	T	T
Template Predicted Secondary structure																																																										.	.	.
Template SS confidence
		505	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560				.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.		.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.									.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.			.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.																	.	.	.	.	.	.	.	.																					.	.
Query SS confidence																		.																	.	.	.	.	.	.	.	.																					.	.
Query Sequence		D	G	Q	S	G	E	K	F	L	R	E	L	C	E	V	D	.	L	L	V	L	D	E	I	G	I	Q	R	E	T	K	N	E	.	.	.	.	.	.	.	.	Q	V	V	L	H	Q	I	V	D	R	R	T	A	S	M	R	S	V	G	M	.	.	L	T	N	L	N	Y	E	A	M	K	T	L	L	G	E	R	I
Query Conservation																		.																	.	.	.	.	.	.	.	.																					.	.
Alig confidence																		.																	.	.	.	.	.	.	.	.																					.	.					.	.	.	.	.
Template Conservation																																																																					.	.	.	.	.
Template Sequence		C	Q	A	M	K	K	I	F	D	D	A	Y	K	S	Q	L	S	C	V	V	V	D	D	I	E	R	L	L	D	Y	V	P	I	G	P	R	F	S	N	L	V	L	Q	A	L	L	V	L	L	K	K	A	P	P	Q	G	R	K	L	L	I	I	G	T	T	S	R	.	.	.	.	.	K	D	V	L	Q	E	M	E
Template Known Secondary structure														T	S	S													T	T		B	T	T	T	T	B													T	T				S	T	T										S		.	.	.	.	.							T	T
Template Predicted Secondary structure																																																																					.	.	.	.	.
Template SS confidence
		582	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.						.	650	.	.	.	.	.	.
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	D	R	M	T	M	N	G	G	R	W	V	N	F	N	W	E	S	W	R	P	N	V	V	Q
Query Conservation
Alig confidence					.	.	.
Template Conservation					.	.	.
Template Sequence		M	L	N	.	.	.	A	F	S	T	T	I	H	V	P	N	I	A	T	G	E	Q	L	L	E
Template Known Secondary structure		G	G	G	.	.	.	T	S	S
Template Predicted Secondary structure					.	.	.
Template SS confidence
		657	.	.				660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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