Job Description P77546 Confidence 97.98% Date Thu Jan 5 12:30:26 GMT 2012 Rank 126 Aligned Residues 128 % Identity 13% Template c1jr3E_ PDB info PDB header:transferase Chain: E: PDB Molecule:dna polymerase iii, delta' subunit; PDBTitle: crystal structure of the processivity clamp loader gamma2 complex of e. coli dna polymerase iii Resolution 2.70 Å

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		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.																						.	.	.	.	.	.	.	.									140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.
Query SS confidence																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.
Query Sequence		C	T	N	F	A	F	S	G	K	P	G	T	G	K	N	H	L	A	A	A	I	G	N	R	L	L	K	D	G	Q	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	I	V	V	T	V	A	D	.	.	.	.	.	.	.	.	V	M	S	A	L	H	A	S	Y	D	D	G
Query Conservation																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.
Alig confidence																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		H	H	A	L	L	I	Q	A	L	P	G	M	G	D	D	A	L	I	Y	A	L	S	R	Y	L	L	C	Q	Q	P	Q	G	H	K	S	C	G	H	C	R	G	C	Q	L	M	Q	A	G	T	H	P	D	Y	Y	T	L	A	P	E	K	G	K	N	T	L	G	V	D	A	V	R	E	V	T	E	K	L	N	E	H
Template Known Secondary structure			S								T	T	S	S													T		S	S			S	S	S			S		S								T	S			S	S								T	T	S	S	S	B													S	S
Template Predicted Secondary structure
Template SS confidence
		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	S	G	E	K	F	L	R	E	L	C	E	V	D	L	L	V	L	D	E	I	G	I	Q	R	E	T	K	N	E	Q	V	V	L	H	Q	I	V	D	R	R	T	A	S	M	R	S	V	G	M	L	T	N	L	N	Y	E	A	M	K	T	L	L	G	E	R	I	M	D	R	M	T	M	N	G	G	R	W	V	N
Query Conservation
Alig confidence							.	.	.	.	.	.	.									.	.																				.													.	.	.	.	.														.	.	.
Template Conservation							.	.	.	.	.	.	.									.	.																				.													.	.	.	.	.														.	.	.
Template Sequence		A	R	L	G	G	.	.	.	.	.	.	.	A	K	V	V	W	V	T	D	.	.	A	A	L	L	T	D	A	A	A	N	A	L	L	K	T	L	E	E	P	.	P	A	E	T	W	F	F	L	A	T	R	E	.	.	.	.	.	P	E	R	L	L	A	T	L	R	S	R	C	R	.	.	.	L	H	Y	L	A
Template Known Secondary structure			T	T	S	S	.	.	.	.	.	.	.							S		.	.	G	G	G	B														S		.		T	T								S		.	.	.	.	.	S	T	T	S		T	T	T	T	T	T	S		.	.	.
Template Predicted Secondary structure							.	.	.	.	.	.	.									.	.																				.													.	.	.	.	.														.	.	.
Template SS confidence
		104	.	.	.	.								.	110	.	.	.	.	.	.			.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.		.	.	.	.	140	.	.	.	.	.	.	.						.	.	150	.	.	.	.	.	.	.	.	.	160				.	.	.	.	.
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	N	W	E	S	W	R	P	N	V	V	Q	P	G	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	P	P	E	Q	Y	A	V	T	W	L	S	R	E	V
Template Known Secondary structure																S
Template Predicted Secondary structure
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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