Return to main results Retrieve Phyre Job Id

Job DescriptionP77546
Confidence96.37%DateThu Jan 5 12:30:26 GMT 2012
Rank400Aligned Residues108
% Identity12%Templatec1j8yF_
PDB info PDB header:signaling proteinChain: F: PDB Molecule:signal recognition 54 kda protein; PDBTitle: signal recognition particle conserved gtpase domain from a.2 ambivalens t112a mutant
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   104.....110.........120.........130.........140 ....... ..150......... 160...
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Query Sequence  FAFSGKPGTGKNHLAAAIGNRLLKDGQTVIVVTVADV. . . . MSALHAS. . . . . . . . . . . YDDGQSGEKFLR. . . . . ELCE
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Template Sequence  IMLVGVQG. . . TTAGK. LAYFYKKKGFKVGLVGADVYRPAALEQLQQLGQQIGVPVYGEPGEKDVVGIAKRGVEKFLSEK
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   101....... .110... ......120.........130.........140.........150.........160.........170......
 
   164.....170.........180. ........190.........200.........210.....
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Query Sequence  VDLLVLDEIGIQRETKNE. . QVVLHQIVDRRTASMRSVGMLTNLNYEAMKTLLG
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Template Sequence  MEIIIVDTAGRHGYGEEAALLEEMKNIYEAIKPDEVTLVIDASIGQKAYDLASK
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   181........190.........200.........210.........220.........230....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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