Job Description P77546 Confidence 99.29% Date Thu Jan 5 12:30:26 GMT 2012 Rank 31 Aligned Residues 158 % Identity 20% Template c1in8A_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:holliday junction dna helicase ruvb; PDBTitle: thermotoga maritima ruvb t158v Resolution 1.90 Å

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		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	F	S	N	Y	Q	V	Q	N	E	G	Q	R	Y	A	L	S	Q	A	K	S	I	A	D	E	L	M	T	G	C	T	N	F	A	F	S	G	K	P	G	T	G	K	N	H	L	A	A	A	I	G	N	R	L	L	K	D	G	Q	T	V	I	V	V	T	V	A	D	V	M	S	A	L	H	A	S	Y	D	D	G
Query Conservation
Alig confidence							.																																																	.	.	.													.	.	.	.	.	.	.	.
Template Conservation							.																																																	.	.	.													.	.	.	.	.	.	.	.
Template Sequence		S	L	D	E	F	.	I	G	Q	E	N	V	K	K	K	L	S	L	A	L	E	A	A	K	M	R	G	E	V	L	D	H	V	L	L	A	G	P	P	G	L	G	K	T	T	L	A	H	I	I	A	S	E	L	.	.	.	Q	T	N	I	H	V	T	S	G	P	V	L	.	.	.	.	.	.	.	.	V	K	Q
Template Known Secondary structure		S	G	G	G		.		S																			T										S	S	T	T	S	S													.	.	.	T								T	T	T		.	.	.	.	.	.	.	.		S
Template Predicted Secondary structure							.																																																	.	.	.													.	.	.	.	.	.	.	.
Template SS confidence
		23	.	.	.	.		.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.				.	.	.	.	80	.	.	.	.	.	.	.									.	.	90
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	S	G	E	K	F	L	R	E	L	C	E	V	D	L	L	V	L	D	E	I	G	I	Q	R	E	T	K	N	E	Q	V	V	L	H	Q	I	V	D	R	R	T	A	S	M	R	S	V	G	M	L	T	N	L	N	Y	E	A	M	K	T	L	L	G	E	R	I	M	D	R	M	T	M	N	G	G	R	W	V	N
Query Conservation
Alig confidence																											.	.																																	.	.	.										.	.
Template Conservation																											.	.																																	.	.	.										.	.
Template Sequence		G	D	M	A	A	I	L	T	S	L	E	R	G	D	V	L	F	I	D	E	I	H	R	L	N	.	.	K	A	V	E	E	L	L	Y	S	A	I	E	D	F	Q	I	D	I	Q	P	F	T	L	V	G	A	T	V	R	S	G	L	.	.	.	L	S	S	P	L	R	S	R	F	.	.	G	I	I	L	E	L	D
Template Known Secondary structure										T			T	T							T	G	G	G			.	.														S														S		G	G	G	.	.	.	S						T	T		.	.	S
Template Predicted Secondary structure																											.	.																																	.	.	.										.	.
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.			.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.				.	.	150	.	.	.	.	.	.			.	.	.	160	.	.	.
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	N	W	E	S	W	R	P	N	V	V	Q	P	G	I	A	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	Y	T	V	K	E	L	K	E	I	I	K	R	A	A	S	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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