Job Description P76359 Confidence 98.53% Date Thu Jan 5 12:22:19 GMT 2012 Rank 28 Aligned Residues 132 % Identity 17% Template c3nxsA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:lao/ao transport system atpase; PDBTitle: crystal structure of lao/ao transport system from mycobacterium2 smegmatis bound to gdp Resolution 2.30 Å

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		53	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	Y	R	D	I	L	P	E	L	D	L	V	L	W	L	I	K	A	D	D	R	A	L	S	V	D	E	Y	F	W	R	H	I	L	Q	C	G	H	Q	Q	V	L	F	V	V	T	Q	A	D	K	T	E	P	C	H	E	W	D	M	A	G	I	Q	P	S	P	A	Q	A	Q	N	I	R	E	K	T	E	A	V	F
Query Conservation
Alig confidence																														.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																														.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	E	V	T	V	A	G	M	V	D	T	F	V	F	L	T	L	A	R	T	G	D	Q	L	Q	G	I	K	.	.	.	.	.	K	G	V	L	E	L	A	D	V	I	V	V	N	K	A	D	G	E	H	A	.	.	.	.	.	.	.	.	.	.	.	.	V	E	A	K	A	A	A	R	E	L	S	G	A	I	R
Template Known Secondary structure								T	T		S									S	S	S	S							.	.	.	.	.	T	T		G	G	G		S									G	G	G		.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																														.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.						.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.													.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
		133	.	.	.	.					.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure							.	.	.	.
Query SS confidence							.	.	.	.
Query Sequence		R	L	F	R	P	.	.	.	.	V	H	P	V	V	A	V	S	A	R	T	G	W	E	L	D	T	L	V	S	A	L	M	T	A	L	P	D	H	A	A	S	P	L	M	T	R	L	Q	D	E	L	R	T	E	S	V	R	S	Q	A	R	E	Q	F	T	G	A	V	D	R	I	F	D
Query Conservation							.	.	.	.
Alig confidence							.	.	.	.
Template Conservation
Template Sequence		L	I	Y	P	R	E	S	L	W	R	P	P	V	L	T	M	S	A	V	E	G	T	G	L	P	E	L	W	E	T	V	L	R	H	R	E	V	L	E	E	A	G	E	F	E	A	R	R	R	T	Q	Q	V	E	W	T	W	S	M	V	R	D	A	V	L	D	R	V	M	N	H	P	E
Template Known Secondary structure				S		T	T		S										T	T	T		T	T																		T	T																												T
Template Predicted Secondary structure
Template SS confidence
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions