Job Description P76359 Confidence 97.09% Date Thu Jan 5 12:22:19 GMT 2012 Rank 100 Aligned Residues 94 % Identity 16% Template c3lvrE_ PDB info PDB header:protein transport Chain: E: PDB Molecule:arf-gap with sh3 domain, ank repeat and ph domain- PDBTitle: the crystal structure of asap3 in complex with arf6 in transition2 state soaked with calcium Resolution 3.38 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		54	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.		.	.	.	.	.	80	.	.	.	.	.	.				.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.													.	.	.
Query SS confidence																							.													.	.	.
Query Sequence		Y	R	D	I	L	P	E	L	D	L	V	L	W	L	I	K	A	D	D	R	A	.	L	S	V	D	E	Y	F	W	R	H	I	L	.	.	.	Q	C	G	H	Q	Q	V	L	F	V	V	T	Q	A	D	K	T	E	P	C	H	E	W	D	M	A	G	I	Q	P	S	P	A	Q	A	Q	N	I	R	E	K	T	E
Query Conservation																							.													.	.	.
Alig confidence																							.													.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																												.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		W	R	H	Y	Y	T	G	T	Q	G	L	I	F	V	V	D	C	A	D	R	D	R	I	D	E	A	R	Q	E	L	H	R	I	I	N	D	R	E	M	R	D	A	I	I	L	I	F	A	N	K	Q	D	L	P	D	A	M	K	.	.	.	.	.	.	.	.	.	.	.	.	.	P	H	E	I	Q	E	K	L	G
Template Known Secondary structure		G	G	G	G	T	T	T										S	S			T	T													T	S	T	T		T	T										T	T	S	S	S				.	.	.	.	.	.	.	.	.	.	.	.	.								T	T
Template Predicted Secondary structure																																																												.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.														.	.	.	.	.	.	.	.	140
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	F	R	L	F	R	P	V	H	P	V	V	A	V	S	A	R	T	G	W	E	L	D	T	L	V	S	A	L	M	T
Query Conservation
Alig confidence											.
Template Conservation											.
Template Sequence		L	T	R	I	R	D	R	N	W	.	Y	V	Q	P	S	C	A	T	S	G	D	G	L	Y	E	G	L	T	W	L	T	S
Template Known Secondary structure			T	T			S	S			.						B	T	T	T	T	B	T
Template Predicted Secondary structure											.
Template SS confidence
		141	.	.	.	.	.	.	.	.		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions