Job Description P76359 Confidence 76.45% Date Thu Jan 5 12:22:19 GMT 2012 Rank 260 Aligned Residues 90 % Identity 20% Template c3dpuA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:rab family protein; PDBTitle: roccor domain tandem of rab family protein (roco) Resolution 2.90 Å

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		54	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.		.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
Predicted Secondary structure																																			.
Query SS confidence																																			.
Query Sequence		Y	R	D	I	L	P	E	L	D	L	V	L	W	L	I	K	A	D	D	R	A	L	S	V	D	E	Y	F	W	R	H	I	L	.	Q	C	G	H	Q	Q	V	L	F	V	V	T	Q	A	D	K	T	E	P	C	H	E	W	D	M	A	G	I	Q	P	S	P	A	Q	A	Q	N	I	R	E	K	T	E	A	V	F
Query Conservation																																			.
Alig confidence																	.	.																	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		H	Q	F	F	M	T	R	S	S	V	Y	M	L	L	L	.	.	D	S	R	T	D	S	N	K	H	Y	W	L	R	H	I	E	K	Y	G	G	K	S	P	V	I	V	V	M	N	K	I	D	E	N	P	S	Y	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	E	Q	K	K	I	N
Template Known Secondary structure								S	S								.	.		G	G	G	G	G	G												S	S	S										T	T	T		T	T			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		526	.	.	.	530	.	.	.	.	.	.	.	.	.	540			.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.																			.	580	.	.	.	.	.
		133	.	.	.		.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure						.
Query SS confidence						.
Query Sequence		R	L	F	R	.	P	V	H	P	V	V	A	V	S	A	R	T	G	W	E	L	D	T	L	V	S	A	L	M	T	A	L	P
Query Conservation						.
Alig confidence						.														.
Template Conservation																				.
Template Sequence		E	R	F	P	A	I	E	N	R	F	H	R	I	S	C	V	E	S	.	I	A	K	S	L	K	S	A	V	L	H	P	D	S
Template Known Secondary structure					G	G	G	T	T									T	T	.										T		T	T	S
Template Predicted Secondary structure																				.
Template SS confidence
		586	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.		.	.	.	.	.	.	610	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions