Job Description P76359 Confidence 92.83% Date Thu Jan 5 12:22:19 GMT 2012 Rank 215 Aligned Residues 97 % Identity 12% Template c3cphA_ PDB info PDB header:protein transport Chain: A: PDB Molecule:ras-related protein sec4; PDBTitle: crystal structure of sec4 in complex with rab-gdi Resolution 2.90 Å

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		55	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.				.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
Predicted Secondary structure																																		.	.	.
Query SS confidence																																		.	.	.
Query Sequence		R	D	I	L	P	E	L	D	L	V	L	W	L	I	K	A	D	D	R	A	L	S	V	D	E	Y	F	W	R	H	I	L	.	.	.	Q	C	G	H	Q	Q	V	L	F	V	V	T	Q	A	D	K	T	E	P	C	H	E	W	D	M	A	G	I	Q	P	S	P	A	Q	A	Q	N	I	R	E	K	T	E	A	V
Query Conservation																																		.	.	.
Alig confidence																																		.	.	.																				.	.	.	.	.	.	.	.	.																	.
Template Conservation																																																								.	.	.	.	.	.	.	.	.																	.
Template Sequence		T	A	Y	Y	R	G	A	M	G	I	I	L	V	Y	D	V	T	D	E	R	T	F	T	N	I	K	Q	W	F	K	T	V	N	E	H	A	N	D	E	A	Q	L	L	L	V	G	N	K	S	D	M	E	T	R	.	.	.	.	.	.	.	.	.	V	V	T	A	D	Q	G	E	A	L	A	K	E	L	G	I	.
Template Known Secondary structure						T	T		S								T	T							T												T	T	T		S									T	T		S	S		.	.	.	.	.	.	.	.	.		S													T		.
Template Predicted Secondary structure																																																								.	.	.	.	.	.	.	.	.																	.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140										.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	R	L	F	R	P	V	H	P	V	V	A	V	S	A	R	T	G	W	E	L	D	T	L	V	S	A	L	M	T	A	L	P	D	H	A	A	S
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	P	F	I	E	S	S	A	K	N	D	D	N	V	N	E	I	F	F	T	L	A	K	L	I	Q	E	K	I	D	S
Template Known Secondary structure		.	.	.	.	.	.	.	.						B	T	T	T	T	B	S	S																	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.
Template SS confidence
										157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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