Job Description P76359 Confidence 98.55% Date Thu Jan 5 12:22:19 GMT 2012 Rank 27 Aligned Residues 91 % Identity 21% Template c3agqA_ PDB info PDB header:translation,transferase Chain: A: PDB Molecule:elongation factor ts, elongation factor tu 1, linker, q PDBTitle: structure of viral polymerase form ii Resolution 3.22 Å

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		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
Predicted Secondary structure																																																																															.	.	.
Query SS confidence																																																																															.	.	.
Query Sequence		E	L	D	L	V	L	W	L	I	K	A	D	D	R	A	L	S	V	D	E	Y	F	W	R	H	I	L	Q	C	G	H	Q	Q	V	L	F	V	V	T	Q	A	D	K	T	E	P	C	H	E	W	D	M	A	G	I	Q	P	S	P	A	Q	A	Q	N	I	R	E	K	T	E	A	V	F	R	L	F	R	.	.	.
Query Conservation																																																																															.	.	.
Alig confidence																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.
Template Conservation																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	M	D	G	A	I	L	V	V	A	A	T	D	G	P	M	P	Q	T	R	E	H	I	L	L	G	R	Q	V	G	V	P	Y	I	I	V	F	L	N	K	C	D	M	V	D	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	E	L	L	E	L	V	E	M	E	V	R	E	L	L	S	Q	Y	D
Template Known Secondary structure				S								T	T	T		S		G	G	G										T	T		S										T	T		S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	T												T	G	G	G	T
Template Predicted Secondary structure																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		382	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.																.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.
					137	.	.	140	.	.	.	.	.	.	.	.	.	150	.									.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure		.	.	.																.	.	.	.	.	.	.	.
Query SS confidence		.	.	.																.	.	.	.	.	.	.	.
Query Sequence		.	.	.	P	V	H	P	V	V	A	V	S	A	R	T	G	W	E	.	.	.	.	.	.	.	.	L	D	T	L	V	S	A	L	M	T	A	L	P	D
Query Conservation		.	.	.																.	.	.	.	.	.	.	.
Alig confidence		.	.	.																.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	P	G	D	D	T	P	I	V	R	G	S	A	L	K	A	L	E	G	D	A	E	W	E	A	K	I	L	E	L	A	G	F	L	D	S	Y	I	P	E
Template Known Secondary structure		S		T	T	T								T	T	T	T	T	T	T																		T	S
Template Predicted Secondary structure
Template SS confidence
		447	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions