Job Description P76359 Confidence 97.32% Date Thu Jan 5 12:22:19 GMT 2012 Rank 88 Aligned Residues 114 % Identity 15% Template c2rexD_ PDB info PDB header:signaling protein/lipoprotein Chain: D: PDB Molecule:rho-related gtp-binding protein rho6; PDBTitle: crystal structure of the effector domain of plxnb1 bound with rnd12 gtpase Resolution 2.30 Å

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		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.		.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.					.	.	.	.	.	.	110	.	.	.	.	.	.
Predicted Secondary structure																																															.																		.	.	.	.
Query SS confidence																																															.																		.	.	.	.
Query Sequence		W	W	P	A	T	Y	C	S	R	V	S	G	Y	R	D	I	L	P	E	L	D	L	V	L	W	L	I	K	A	D	D	R	A	L	S	V	D	E	Y	F	W	R	H	I	L	.	Q	C	G	H	Q	Q	V	L	F	V	V	T	Q	A	D	K	T	.	.	.	.	E	P	C	H	E	W	D	M	A	G	I	Q	P
Query Conservation																																															.																		.	.	.	.
Alig confidence																																															.																		.	.	.	.
Template Conservation
Template Sequence		W	D	T	S	G	S	P	Y	Y	D	N	V	R	P	L	C	Y	S	D	S	D	A	V	L	L	C	F	D	I	S	R	P	E	T	V	A	L	K	K	W	R	T	E	I	L	D	Y	C	P	S	T	R	V	L	L	I	G	C	K	T	D	L	R	T	D	L	S	T	L	M	E	L	S	H	Q	K	Q	A	P	I
Template Known Secondary structure							S	G	G	G	T	T	T	G	G	G	G	G	T	T		S								T	T		T	T	T															T	T	S									G	G	G	G	G											T	T
Template Predicted Secondary structure
Template SS confidence
		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.		150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure																																			.
Query SS confidence																																			.
Query Sequence		S	P	A	Q	A	Q	N	I	R	E	K	T	E	A	V	F	R	L	F	R	P	V	H	P	V	V	A	V	S	A	R	T	G	.	W	E	L	D	T	L	V	S	A	L	M	T	A	L
Query Conservation																																			.
Alig confidence															.	.	.	.	.	.	.	.													.
Template Conservation															.	.	.	.	.	.	.	.
Template Sequence		S	Y	E	Q	G	C	A	I	A	K	Q	L	G	.	.	.	.	.	.	.	.	A	E	I	Y	L	E	G	S	A	F	T	S	E	K	S	I	H	S	I	F	R	T	A	S	M	L	C
Template Known Secondary structure													T	T	.	.	.	.	.	.	.	.		S							T	T	T
Template Predicted Secondary structure															.	.	.	.	.	.	.	.
Template SS confidence
		148	.	150	.	.	.	.	.	.	.	.	.	160									.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions