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Job DescriptionP76359
Confidence93.20%DateThu Jan 5 12:22:19 GMT 2012
Rank211Aligned Residues99
% Identity12%Templatec2nzjB_
PDB info PDB header:signaling proteinChain: B: PDB Molecule:gtp-binding protein rem 1; PDBTitle: the crystal structure of rem1 in complex with gdp
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   52.......60.........70.........80.........90.........100.........110.........120.........130.
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Query Sequence  SGYRDILPELDLVLWLIKADDRALSVDEYFWRHILQCGHQQVLFVVTQADKTEPCHEWDMAGIQPSPAQAQNIREKTEAV
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Template Sequence  WSQESCLQGGSAYVIVYSIADRGSFESASELRIQ. LRRTVPIILVGNKADLA. . . . . . . . RCREVSVEEGRACAVVFDC.
Template Known Secondary structure  TTTS
STT
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TT
G........GG

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T
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   145....150.........160.........170........ .180.........190..... ....200.........210....
 
   132.......140.........150.........160........
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Query Sequence  FRLFRPVHPVVAVSARTGWELDTLVSALMTALPDHAA
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Template Sequence  . . . . . . . . KFIETSATLQHNVAELFEGVVRQLRLRRR
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BTTTTBS
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   220.........230.........240........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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