Job Description P76359 Confidence 92.22% Date Thu Jan 5 12:22:19 GMT 2012 Rank 219 Aligned Residues 72 % Identity 14% Template c2il1A_ PDB info PDB header:protein transport Chain: A: PDB Molecule:rab12; PDBTitle: crystal structure of a predicted human gtpase in complex with gdp Resolution 2.10 Å

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		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	V	D	E	Y	F	W	R	H	I	L	Q	C	G	H	Q	Q	V	L	F	V	V	T	Q	A	D	K	T	E	P	C	H	E	W	D	M	A	G	I	Q	P	S	P	A	Q	A	Q	N	I	R	E	K	T	E	A	V	F	R	L	F	R	P	V	H	P	V	V	A	V	S	A	R	T	G	W	E	L	D	T	L
Query Conservation
Alig confidence																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	P	K	W	M	K	M	I	D	K	Y	A	S	E	D	A	E	L	L	L	V	G	N	K	L	D	C	E	T	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	E	I	T	R	Q	Q	G	E	K	F	A	Q	Q	I	T	G	M	R	F	C	E	A	S	A	K	D	N	F	N	V	D	E	I
Template Known Secondary structure													S		T	T										G	G	G	G	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			S											T	S	T	T							B	T	T	T	T	B	S
Template Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.																	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
		156	.	.	.	160	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	S	A	L	M	T	A	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	L	K	L	V	D	D	I
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		293	.	.	.	.	.	.	300

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions