Job Description P76359 Confidence 92.02% Date Thu Jan 5 12:22:19 GMT 2012 Rank 221 Aligned Residues 119 % Identity 13% Template c2hupB_ PDB info PDB header:signaling protein Chain: B: PDB Molecule:ras-related protein rab-43; PDBTitle: crystal structure of human rab43 in complex with gdp Resolution 2.05 Å

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		29	30	.	.	.	.	.	.	.	.	.	40	.																	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.				.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																														.	.	.
Query SS confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																														.	.	.
Query Sequence		G	K	S	L	L	F	S	R	V	L	Y	R	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	W	W	P	A	T	Y	C	S	R	V	S	G	Y	R	D	I	L	P	E	L	D	L	V	L	W	L	I	K	A	D	D	R	A	L	S	V	D	E	Y	F	W	R	H	I	L	.	.	.	Q	C	G
Query Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																														.	.	.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																														.	.	.
Template Conservation
Template Sequence		G	K	T	C	V	V	Q	R	F	K	T	G	A	F	D	F	T	M	K	T	L	E	I	R	V	K	L	Q	I	W	D	T	A	G	Q	E	R	F	R	T	I	T	Q	S	Y	Y	R	S	A	N	G	A	I	L	A	Y	D	I	T	K	R	S	S	F	L	S	V	P	H	W	I	E	D	V	R	K	Y	A	G	S
Template Known Secondary structure		S											S																					T	T		G	G	G									T	T		S								T	T																			S		S
Template Predicted Secondary structure
Template SS confidence
		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	Q	Q	V	L	F	V	V	T	Q	A	D	K	T	E	P	C	H	E	W	D	M	A	G	I	Q	P	S	P	A	Q	A	Q	N	I	R	E	K	T	E	A	V	F	R	L	F	R	P	V	H	P	V	V	A	V	S	A	R	T	G	W	E	L	D	T	L	V	S	A	L	M	T	A	L
Query Conservation
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	I	V	Q	L	L	I	G	N	K	S	D	L	S	E	L	R	E	V	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	A	E	A	Q	S	L	A	E	H	Y	D	I	L	C	A	I	E	T	S	A	K	D	S	S	N	V	E	E	A	F	L	R	V	A	T	E	L
Template Known Secondary structure												G	G	G	G	G	G			S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											T	T		S							T	T	T		T	T
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.																	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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