Job Description P76359 Confidence 95.33% Date Thu Jan 5 12:22:19 GMT 2012 Rank 172 Aligned Residues 71 % Identity 13% Template c2gedB_ PDB info PDB header:protein transport, signaling protein Chain: B: PDB Molecule:signal recognition particle receptor beta PDBTitle: signal recognition particle receptor beta-subunit in2 nucleotide-free dimerized form Resolution 2.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		54	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70			.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.							.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
Predicted Secondary structure																			.	.																	.	.	.	.	.	.
Query SS confidence																			.	.																	.	.	.	.	.	.
Query Sequence		Y	R	D	I	L	P	E	L	D	L	V	L	W	L	I	K	A	.	.	D	D	R	A	L	S	V	D	E	Y	F	W	R	H	I	L	.	.	.	.	.	.	Q	C	G	H	Q	Q	V	L	F	V	V	T	Q	A	D	K	T	E	P	C	H	E	W	D	M	A	G	I	Q	P	S	P	A	Q	A	Q	N	I	R
Query Conservation																			.	.																	.	.	.	.	.	.
Alig confidence																			.	.																	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.
Template Conservation																																																														.	.	.	.	.	.	.	.	.
Template Sequence		L	K	T	R	A	K	F	V	K	G	L	I	F	M	V	D	S	T	V	D	P	K	K	L	T	T	T	A	E	F	L	V	D	I	L	S	I	T	E	S	S	C	E	N	G	I	D	I	L	I	A	C	N	K	S	E	L	F	T	A	.	.	.	.	.	.	.	.	.	R	P	P	S	K	I	K	D	A	L	E
Template Known Secondary structure						G	G	G										S	S																								S	T	T											T	T	S	T	T		.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																														.	.	.	.	.	.	.	.	.
Template SS confidence
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.										.	.	.	.	.	.	.	.	170	.	.
		126	.	.	.	130	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	K	T	E	A	V	F	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	E	I	Q	K	V	I	E
Template Known Secondary structure									T
Template Predicted Secondary structure
Template SS confidence
		173	.	.	.	.	.	.	180

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions