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Job DescriptionP76359
Confidence86.20%DateThu Jan 5 12:22:19 GMT 2012
Rank247Aligned Residues108
% Identity11%Templatec2fv8A_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:rho-related gtp-binding protein rhob; PDBTitle: the crystal structure of rhob in the gdp-bound state
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   52.......60.........70.........80...... ...90.........100..... ....110.........120....
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Query Sequence  SGYRDILPELDLVLWLIKADDRALSVDEYFWRHIL. . . QCGHQQVLFVVTQADKTEP. . . . CHEWDMAGIQPSPAQAQNI
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Template Conservation                                                                                  
Template Sequence  RLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPIILVANKKDLRSDEHVRTELARMKQEPVRTDDGRAM
Template Known Secondary structure  TTGGGG
TT

TT
TSTT


GGGGG
TT




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   68.70.........80.........90.........100.........110.........120.........130.........140.......
 
   125....130.........140.........150.........160.......
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Query Sequence  REKTEAVFRLFRPVHPVVAVSARTGWELDTLVSALMTALPDHA
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Template Sequence  AVRIQ. . . . . . . . AYDYLECSAKTKEGVREVFETATRAALQKR
Template Known Secondary structure  TT........
S

TTT
TTS

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   148.150.. .......160.........170.........180..
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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