Job Description P76359 Confidence 51.83% Date Thu Jan 5 12:22:19 GMT 2012 Rank 281 Aligned Residues 108 % Identity 11% Template c1tndA_ PDB info PDB header:binding protein(gtp) Chain: A: PDB Molecule:transducin; PDBTitle: the 2.2 angstroms crystal structure of transducin-alpha complexed with2 gtp gamma s Resolution 2.20 Å

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		52	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.												.	.	.	.	.	.	.	80	.	.	.	.	.	.				.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.													.
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.															.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.	.	.	.	.															.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	G	Y	R	D	I	L	P	E	L	D	L	V	L	W	L	I	K	A	D	D	.	.	.	.	.	.	.	.	.	.	.	R	A	L	S	V	D	E	Y	F	W	R	H	I	L	.	.	.	Q	C	G	H	Q	Q	V	L	F	V	V	T	Q	A	D	K	T	E	.	.	.	.	.	.	.	.	.	.	.	.	P
Query Conservation																							.	.	.	.	.	.	.	.	.	.	.															.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.															.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	K	W	I	H	C	F	E	G	V	T	C	I	I	F	I	A	A	L	S	A	Y	D	M	V	L	V	E	D	D	E	V	N	R	M	H	E	S	L	H	L	F	N	S	I	C	N	H	R	Y	F	A	T	T	S	I	V	L	F	L	N	K	K	D	V	F	S	E	K	I	K	K	A	H	L	S	I	C	F	P
Template Known Secondary structure		G	G	G	G	G	G		T	T		S								G	G	G	G	G		B		S	S		T	T	S	B														T		S	G	G	G	S																		T	T	S		G	G	G	T		T
Template Predicted Secondary structure
Template SS confidence
		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure																																				.
Query SS confidence																																				.
Query Sequence		C	H	E	W	D	M	A	G	I	Q	P	S	P	A	Q	A	Q	N	I	R	E	K	T	E	A	V	F	R	L	F	R	P	V	H	.	P	V	V	A	V	S	A	R	T	G	W	E	L	D	T	L	V	S	A	L	M	T	A	L
Query Conservation																																				.
Alig confidence		.	.	.	.																															.
Template Conservation		.	.	.	.
Template Sequence		.	.	.	.	D	Y	N	G	P	N	T	Y	E	D	A	G	N	Y	I	K	V	Q	F	L	E	L	N	M	R	R	D	V	K	E	I	Y	S	H	M	T	C	A	T	D	T	Q	N	V	K	F	V	F	D	A	V	T	D	I	I
Template Known Secondary structure		.	.	.	.	T			S																	T	T		T	T	B	T	T	B									T	T
Template Predicted Secondary structure		.	.	.	.
Template SS confidence
						285	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions