Job Description P76359 Confidence 98.25% Date Thu Jan 5 12:22:19 GMT 2012 Rank 44 Aligned Residues 100 % Identity 14% Template c1mj1A_ PDB info PDB header:ribosome Chain: A: PDB Molecule:elongation factor tu; PDBTitle: fitting the ternary complex of ef-tu/trna/gtp and ribosomal proteins2 into a 13 a cryo-em map of the coli 70s ribosome Resolution 13.00 Å

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		58	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		L	P	E	L	D	L	V	L	W	L	I	K	A	D	D	R	A	L	S	V	D	E	Y	F	W	R	H	I	L	Q	C	G	H	Q	Q	V	L	F	V	V	T	Q	A	D	K	T	E	P	C	H	E	W	D	M	A	G	I	Q	P	S	P	A	Q	A	Q	N	I	R	E	K	T	E	A	V	F	R	L	F	R	.
Query Conservation																																																																																	.
Alig confidence																																																		.	.	.	.	.	.	.	.	.	.	.	.																				.
Template Conservation																																																		.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	A	Q	M	D	G	A	I	L	V	V	S	A	A	D	G	R	M	R	Q	T	R	E	H	I	L	L	A	R	Q	V	G	V	R	Y	I	V	V	F	M	N	K	V	D	M	V	D	D	.	.	.	.	.	.	.	.	.	.	.	.	R	E	L	L	D	L	V	E	M	E	V	R	D	L	L	N	Q	Y	E	F
Template Known Secondary structure			T	T		S	S							T	T	T		S														T	T											G	G	G				.	.	.	.	.	.	.	.	.	.	.	.																		T	T	S
Template Predicted Secondary structure																																																		.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.													.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
				137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.																			.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	P	V	H	P	V	V	A	V	S	A	R	T	G	W	E	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	T	L	V	S	A	L	M	T	A	L	P	D	H	A	A	S
Query Conservation		.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	G	D	E	V	R	V	I	R	G	S	A	L	L	A	L	E	E	M	H	K	N	R	K	T	K	R	G	E	N	E	W	V	D	K	I	W	E	L	L	D	A	I	D	E	Y	I	R	T	R	V	R	D
Template Known Secondary structure			T	T	T	S																		T	T			T	T	T																	T	S						B
Template Predicted Secondary structure
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions