 |
Job Description | P76141 | Confidence | 94.05% | Date | Thu Jan 5 12:19:32 GMT 2012 |
Rank | 259 | Aligned Residues | 48 |
% Identity | 19% | Template | d3bwga1 |
SCOP info | DNA/RNA-binding 3-helical bundle
| "Winged helix" DNA-binding domain
| GntR-like transcriptional regulators
|
Resolution | 2.09 |
|
  |   |
16 | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | |
|
|
. | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . | . | . |
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | E | Q | V | A | R | I | A | W | F | Y | Y | H | D | G | L | . |
. |
. |
T | Q | S | E | I | S | D | R | L | G | L | T | R | L | K | V | S | R | L | L | E | K | G | H | Q | S | G | I | I | R | V | Q |
Query Conservation |   |
  |   |   |   |   |   |
|
|   |
|
|
|   |   |
|   | . | . | . |
|
|   |
|
|
|   |   |
|
|
|
|
|   |   |
|
|
|
|
|   |   |
|
|   |   |
|
|
|   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |   |
|   |   |
|   |   |   |   |
|   |   |
|
|
|   |   |   |
|
|   |   |   |   |
|
|
|   |
|
|
|   |
|
|   |   |
|   |   |   |
|   |
|   |   |   |
Template Sequence |   |
T | E | I | E | T | Y | I | E | E | H | Q | L | Q | Q | G | D | K | L | P | V | L | E | T | L | X | A | Q | F | E | V | S | K | S | T | I | T | K | S | L | E | L | L | E | Q | K | G | A | I | F | Q | V |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  | T | T |
|
| T | T |
| B |
|
|
|  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
9 | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|