Return to main results Retrieve Phyre Job Id

Job DescriptionP76141
Confidence95.84%DateThu Jan 5 12:19:32 GMT 2012
Rank165Aligned Residues53
% Identity9%Templated1p4xa2
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain MarR-like transcriptional regulators
Resolution2.20

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   18.20.........30.........40.........50.........60.........70
Predicted Secondary structure 













Query SS confidence 




















































Query Sequence  QVARIAWFYYHDGLTQSEISDRLGLTRLKVSRLLEKGHQSGIIRVQINSRFEG
Query Conservation      

 


  
 

 


  




  




  

  


 
 
      
Alig confidence 




















































Template Conservation   

  
       

  


  
 
    

  
  

  
 
 
     
 
Template Sequence  TILAIITSQNKNIVLLKDLIETIHHKYPQTVRALNNLKKQGYLIKERSTEDER
Template Known Secondary structure  TTTT

SSS
TSS
SSSTT
Template Predicted Secondary structure 













Template SS confidence 




















































   162.......170.........180.........190.........200.........210....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions