Job Description P76141 Confidence 100.00% Date Thu Jan 5 12:19:32 GMT 2012 Rank 3 Aligned Residues 248 % Identity 21% Template c3nzeB_ PDB info PDB header:transcription regulator Chain: B: PDB Molecule:putative transcriptional regulator, sugar-binding family; PDBTitle: the crystal structure of a domain of a possible sugar-binding2 transcriptional regulator from arthrobacter aurescens tc1. Resolution 1.70 Å

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		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.			.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure																																		.	.
Query SS confidence																																		.	.
Query Sequence		S	R	F	E	G	C	L	E	Y	E	T	Q	L	R	R	Q	F	S	L	Q	H	V	R	V	I	P	G	L	A	D	A	D	.	.	V	G	G	R	L	G	I	G	A	A	H	M	L	M	S	L	L	Q	P	Q	Q	M	L	A	I	G	F	G	E	A	T	M	N	T	L	Q	R	L	S	G	F	I	S	S	Q	Q
Query Conservation																																		.	.
Alig confidence																																		.	.																																									.
Template Conservation																																																																												.
Template Sequence		S	P	F	D	T	G	P	E	L	E	S	Q	I	R	N	Q	Y	G	V	D	V	H	V	V	P	V	L	D	T	L	N	E	A	E	T	L	D	R	V	A	X	Q	A	A	R	T	I	G	P	L	V	D	S	N	A	I	I	G	V	A	W	G	A	T	L	S	A	V	S	R	H	L	T	R	.	K	X	T	H	D
Template Known Secondary structure			T	T																									T	T	S																		G	G	G			T	T								S								T	T				.				S	S
Template Predicted Secondary structure																																																																												.
Template SS confidence
		56	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.		130	.	.	.	.
		144	.	.	.	.	.	150	.	.	.	.										.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.	.	.
Query Sequence		I	R	L	V	T	L	S	G	G	V	G	.	.	.	.	.	.	.	.	.	S	Y	M	T	G	I	G	Q	L	N	A	A	C	S	V	N	I	I	P	A	P	L	R	A	S	S	A	D	I	A	R	T	L	K	N	E	N	C	V	K	D	V	L	L	A	A	Q	A	A	D	V	A	I	V	G	I	G	A	V	S
Query Conservation													.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	I	V	V	Q	L	N	G	A	G	N	X	Q	T	T	G	I	T	Y	A	S	D	I	X	R	R	F	G	S	A	Y	G	A	R	V	E	Q	F	P	V	P	A	F	F	D	H	A	S	T	K	T	A	X	W	N	E	R	S	V	Q	R	I	L	D	L	Q	A	R	X	S	I	A	I	F	G	V	G	S	V	D
Template Known Secondary structure								S					T	T	S		S																T								S		S	S		S									T	T												T	T		S
Template Predicted Secondary structure
Template SS confidence
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	Q	D	D	A	T	I	I	R	S	G	Y	I	S	Q	G	E	Q	L	M	I	G	R	K	G	A	V	G	D	I	L	G	Y	F	F	D	A	K	G	D	V	V	T	N	I	K	I	H	N	E	L	I	G	L	P	L	S	A	L	K	T	I	P	V	R	V	G	V	A	G	G	E	N	K	A	E	A	I	A	A
Query Conservation
Alig confidence																																														.
Template Conservation																																														.
Template Sequence		S	D	Y	P	S	H	V	Y	A	G	G	Y	L	D	E	H	D	L	T	X	L	A	A	D	D	V	V	G	D	V	A	T	V	F	F	R	S	D	G	S	S	D	G	I	.	T	L	N	E	R	S	T	G	P	S	H	E	Q	L	R	Q	V	R	R	R	I	C	V	V	S	G	A	S	K	I	N	G	L	Q	G
Template Known Secondary structure		S	S	S	T	T	S			T	T	S	S	S		G	G	G							T	T						T	T					T	T	S			T	T		.	G	G	G	G	G			S							T	T	S	S								S	G	G	G
Template Predicted Secondary structure																																														.
Template SS confidence
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.		.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.
		295	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	M	K	G	G	Y	I	N	A	L	V	T	D	Q	D	T	A	A	A	I	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	L	A	A	G	L	A	T	D	L	I	L	D	E	A	S	A	R	R	L	V
Template Known Secondary structure					T	T			S
Template Predicted Secondary structure
Template SS confidence
		294	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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