Job Description P76141 Confidence 94.66% Date Thu Jan 5 12:19:32 GMT 2012 Rank 221 Aligned Residues 34 % Identity 15% Template c3iydF_ PDB info PDB header:transcription/dna Chain: F: PDB Molecule:rna polymerase sigma factor rpod; PDBTitle: three-dimensional em structure of an intact activator-dependent2 transcription initiation complex Resolution 19.80 Å

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		21	.	.	.	.	.	.					.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.
Predicted Secondary structure									.	.	.	.
Query SS confidence									.	.	.	.
Query Sequence		R	I	A	W	F	Y	Y	.	.	.	.	H	D	G	L	T	Q	S	E	I	S	D	R	L	G	L	T	R	L	K	V	S	R	L	L	E	K	G
Query Conservation									.	.	.	.
Alig confidence									.	.	.	.
Template Conservation
Template Sequence		K	V	L	R	M	R	F	G	I	D	M	N	T	D	H	T	L	E	E	V	G	K	Q	F	D	V	T	R	E	R	I	R	Q	I	E	A	K	A
Template Known Secondary structure									T	S	S	S					S	T	T	G	G	G	T	T	T	S	S		S	S
Template Predicted Secondary structure
Template SS confidence
		557	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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