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Job DescriptionP76141
Confidence99.44%DateThu Jan 5 12:19:32 GMT 2012
Rank13Aligned Residues203
% Identity13%Templatec3hn6D_
PDB info PDB header:isomeraseChain: D: PDB Molecule:glucosamine-6-phosphate deaminase; PDBTitle: crystal structure of glucosamine-6-phosphate deaminase from borrelia2 burgdorferi
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   97..100.........110.... .... .120.........130.........140.........150.........160.........
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Query Sequence  DVGGRLGIGAAHMLMSLL. . . . . . QPQQ. MLAIGFGEATMNTLQRLSGFISSQQIRLVTLSGGVGSYMTGIGQLNAACSV
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Template Sequence  PTYEDISKWAANHVAQKINEFSPTKENPFILGLPTGSSPIGMYKNLIELNKNKKISFQNVITFNMDEYIGIEENHPESYH
Template Known Secondary structure  SS


SSS


SSTTTTS


TTSTT

TTSTTS
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   7..10.........20.........30.........40.........50.........60.........70.........80......
 
   170.. ... ....180.........190.........200.........210.........220..... ....230.
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Query Sequence  NII. . . . . . . . PAP. . . LRASSADIARTLKNENCVKDVLLAAQAADVAIVGIGAVSQQDDATIIRSG. . . . . . . YISQGE
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Template Sequence  SFMWNNFFSHIDIKKENINILNGNASNLKKECEEYEKKIKSFGGIMLFVGGIGPDGHIAFNEPGSSLTSRTRIKTLTQDT
Template Known Secondary structure  TGGGS


GGG


TT
S
TTS
S

TTS
BTTB
TT

TT

S

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   87..90.........100.........110.........120.........130.........140.........150.........160......
 
   232.......240.........250.........260.........270.........280.........290.........300
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Query Sequence  QLMIGRKGAVGDILGYFFDAKGDVVTNIKIHNELIGLPLSALKTIPVRVGVAGGENKAEAIAAAMKGGY. . . . . . . . . . .
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Template Sequence  IIANSRFFE. . . . . . . . . . . . . . . GDVNKVPKNALTVGIGTIMDSQEVLIIVNGHNKARALKHAIEKGVNHMWTISALQL
Template Known Secondary structure  TTTT...............T
STTS
S

TSS

SGGGTS


TTSGGGGGGG
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   167..170..... ....180.........190.........200.........210.........220.........230.
 
   301........310....
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Query Sequence  . . INALVTDQDTAAAI
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Template Sequence  HKNAIIVSDKNATYEL
Template Known Secondary structure 
SSSGGGTTS
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   232.......240.......
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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