Job Description P76141 Confidence 100.00% Date Thu Jan 5 12:19:32 GMT 2012 Rank 1 Aligned Residues 297 % Identity 26% Template c2w48D_ PDB info PDB header:transcription Chain: D: PDB Molecule:sorbitol operon regulator; PDBTitle: crystal structure of the full-length sorbitol operon2 regulator sorc from klebsiella pneumoniae Resolution 3.20 Å

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	M	C	E	E	E	Q	V	A	R	I	A	W	F	Y	Y	H	D	G	L	T	Q	S	E	I	S	D	R	L	G	L	T	R	L	K	V	S	R	L	L	E	K	G	H	Q	S	G	I	I	R	V	Q	I	N	S	R	F	E	G	C	L	E	Y	E	T	Q	L	R	R	Q	F	S	L	Q	H	V	R	V	I	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	S	D	D	I	R	L	I	V	K	I	A	Q	L	Y	Y	E	Q	D	M	T	Q	A	Q	I	A	R	E	L	G	I	Y	R	T	T	I	S	R	L	L	K	R	G	R	E	Q	G	I	V	T	I	A	I	N	Y	D	Y	N	E	N	L	W	L	E	Q	Q	L	K	Q	K	F	G	L	K	E	A	V	V	A	S
Template Known Secondary structure				S	T														S												T			S													T	T	S	S						T	T																T		S
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		92	.	.	.	.	.			.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.										.	.	.	.	.	160
Predicted Secondary structure								.	.																																																										.	.	.	.	.	.	.	.	.
Query SS confidence								.	.																																																										.	.	.	.	.	.	.	.	.
Query Sequence		G	L	A	D	A	D	.	.	V	G	G	R	L	G	I	G	A	A	H	M	L	M	S	L	L	Q	P	Q	Q	M	L	A	I	G	F	G	E	A	T	M	N	T	L	Q	R	L	S	G	F	I	S	S	Q	Q	I	R	L	V	T	L	S	G	G	V	G	.	.	.	.	.	.	.	.	.	S	Y	M	T	G	I
Query Conservation								.	.																																																										.	.	.	.	.	.	.	.	.
Alig confidence								.	.																																																										.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	D	G	L	L	E	E	E	Q	L	S	A	M	G	Q	H	G	A	L	L	V	D	R	L	L	E	P	G	D	I	I	G	F	S	W	G	R	A	V	R	S	L	V	E	N	L	P	Q	R	S	Q	S	R	Q	V	I	C	V	P	I	I	G	G	P	S	G	K	L	E	S	R	Y	H	V	N	T	L	T	Y	G
Template Known Secondary structure			S																									T	T								S									T					S	S									S	B		B		T	T	S	S		G	G	G
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		G	Q	L	N	A	A	C	S	V	N	I	I	P	A	P	L	R	A	S	S	A	D	I	A	R	T	L	K	N	E	N	C	V	K	D	V	L	L	A	A	Q	A	A	D	V	A	I	V	G	I	G	A	V	S	Q	Q	D	D	A	T	I	I	R	S	G	Y	I	S	Q	G	E	Q	L	M	I	G	R	K	G	A
Query Conservation
Alig confidence																																																									.	.
Template Conservation																																																									.	.
Template Sequence		A	A	A	R	L	K	A	E	S	H	L	A	D	F	P	A	L	L	D	N	P	L	I	R	N	G	I	M	Q	S	Q	H	F	K	T	I	S	S	Y	W	D	S	L	D	V	A	L	V	G	I	G	S	P	A	I	.	.	R	D	G	A	N	W	H	A	F	Y	G	S	E	E	S	D	D	L	N	A	R	H	V
Template Known Secondary structure							T								S	B	S	B		S										T	S											T	T									B		T	T		.	.		S	S	S						T	T	T									T	T
Template Predicted Secondary structure																																																									.	.
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.			.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	G	D	I	L	G	Y	F	F	D	A	K	G	D	V	V	T	N	I	K	I	H	N	E	L	I	G	L	P	L	S	A	L	K	T	I	P	V	R	V	G	V	A	G	G	E	N	K	A	E	A	I	A	A	A	M	K	G	G	Y	I	N	A	L	V	T	D	Q	D	T	A	A	A	I	L	R
Query Conservation
Alig confidence																.	.	.	.	.	.
Template Conservation																.	.	.	.	.	.
Template Sequence		A	G	D	I	C	S	R	F	Y	D	I	N	G	G	.	.	.	.	.	.	L	S	E	K	T	L	S	I	E	M	A	K	L	R	Q	A	R	Y	S	I	G	I	A	M	G	E	E	K	Y	S	G	I	L	G	A	L	H	G	R	Y	I	N	C	L	V	T	N	R	E	T	A	E	L	L	L	K
Template Known Secondary structure						T	T					T	T	S		.	.	.	.	.	.				S	B		B								T	S	S									S	S	S										T	T	S		S													T
Template Predicted Secondary structure																.	.	.	.	.	.
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.							.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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