Job Description P76141 Confidence 100.00% Date Thu Jan 5 12:19:32 GMT 2012 Rank 7 Aligned Residues 235 % Identity 26% Template c2o0mA_ PDB info PDB header:transcription Chain: A: PDB Molecule:transcriptional regulator, sorc family; PDBTitle: the crystal structure of the putative sorc family transcriptional2 regulator from enterococcus faecalis Resolution 1.60 Å

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		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.			.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.		.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.		.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure																												.	.																						.																				.
Query SS confidence																												.	.																						.																				.
Query Sequence		L	E	Y	E	T	Q	L	R	R	Q	F	S	L	Q	H	V	R	V	I	P	G	L	A	D	A	D	.	.	V	G	G	R	L	G	I	G	A	A	H	M	L	M	S	L	L	Q	P	Q	Q	.	M	L	A	I	G	F	G	E	A	T	M	N	T	L	Q	R	L	S	G	.	F	I	S	S	Q	Q	I	R	L	V
Query Conservation																												.	.																						.																				.
Alig confidence																												.	.																						.																				.
Template Conservation
Template Sequence		H	Q	I	E	K	E	X	T	Q	Y	F	G	I	Q	R	C	I	V	V	A	G	D	S	D	I	Q	K	K	V	L	S	D	F	G	D	V	L	T	N	T	L	N	L	L	L	P	N	G	E	N	T	I	A	V	X	G	G	T	T	X	A	X	V	A	E	N	X	G	S	L	E	T	E	K	R	H	N	L	F	V
Template Known Secondary structure													T		S						S	S		T	T	T		T																				S										S									T							S	S
Template Predicted Secondary structure
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
		148	.	150	.	.	.	.								.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure									.	.	.	.	.	.	.
Query SS confidence									.	.	.	.	.	.	.
Query Sequence		T	L	S	G	G	V	G	.	.	.	.	.	.	.	S	Y	M	T	G	I	G	Q	L	N	A	A	C	S	V	N	I	I	P	A	P	L	R	A	S	S	A	D	I	A	R	T	L	K	N	E	N	C	V	K	D	V	L	L	A	A	Q	A	A	D	V	A	I	V	G	I	G	A	V	S	Q	Q	D	D	A	T
Query Conservation									.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.																									.																																					.	.	.	.	.
Template Conservation																																								.																																					.	.	.	.	.
Template Sequence		P	A	R	G	G	I	G	E	A	V	S	V	Q	A	N	S	I	S	A	V	X	A	N	K	T	G	G	N	Y	R	A	L	Y	V	P	E	Q	L	.	S	R	E	T	Y	N	S	L	L	Q	E	P	S	I	Q	E	V	L	T	L	I	S	H	A	N	C	V	V	H	S	I	G	R	A	L	H	.	.	.	.	.
Template Known Secondary structure			S	B	S						G	G	G	S													T										S	S		.										T													T		S												.	.	.	.	.
Template Predicted Secondary structure																																								.																																					.	.	.	.	.
Template SS confidence
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.		.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
Predicted Secondary structure
Query SS confidence
Query Sequence		I	I	R	S	G	Y	I	S	Q	G	E	Q	L	M	I	G	R	K	G	A	V	G	D	I	L	G	Y	F	F	D	A	K	G	D	V	V	T	N	I	K	I	H	N	E	L	I	G	L	P	L	S	A	L	K	T	I	P	V	R	V	G	V	A	G	G	E	N	K	A	E	A	I	A	A	A	M	K	G	G	Y
Query Conservation
Alig confidence																																						.	.	.	.
Template Conservation																																						.	.	.	.
Template Sequence		X	A	A	R	R	K	X	S	D	D	E	X	V	X	L	K	Q	K	N	A	V	A	E	S	F	G	Y	F	F	D	E	E	G	K	V	V	.	.	.	.	Y	K	I	P	R	I	G	L	Q	L	K	N	L	Q	E	I	P	Y	V	V	A	I	A	G	G	K	T	K	A	K	A	I	R	A	Y	X	K	N	A	P
Template Known Secondary structure						T	T												T	T						T	T					T	T	S				.	.	.	.						S	B			G	G	G	G	G	G		S								S	G	G	G									T	T	S
Template Predicted Secondary structure																																						.	.	.	.
Template SS confidence
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.					.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
		301	.		.	.	.	.	.	.	.	310	.	.	.	.	.	.
Predicted Secondary structure				.
Query SS confidence				.
Query Sequence		I	N	.	A	L	V	T	D	Q	D	T	A	A	A	I	L	R
Query Conservation				.
Alig confidence				.
Template Conservation
Template Sequence		K	Q	T	W	L	I	T	D	E	A	A	A	N	E	I	L	K
Template Known Secondary structure		T	T														T
Template Predicted Secondary structure
Template SS confidence
		325	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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