Job Description P76141 Confidence 98.99% Date Thu Jan 5 12:19:32 GMT 2012 Rank 24 Aligned Residues 181 % Identity 13% Template c1y89B_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:devb protein; PDBTitle: crystal structure of devb protein Resolution 2.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.			.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure																								.	.																																																							.	.
Query SS confidence																								.	.																																																							.	.
Query Sequence		D	V	G	G	R	L	G	I	G	A	A	H	M	L	M	S	L	L	Q	P	Q	Q	.	.	M	L	A	I	G	F	G	E	A	T	M	N	T	L	Q	R	L	S	G	F	I	S	S	Q	Q	I	R	L	V	T	L	S	G	G	V	G	S	Y	M	T	G	I	G	Q	L	N	A	A	C	S	V	N	I	I	.	.
Query Conservation																								.	.																																																							.	.
Alig confidence																								.	.																																									.														.	.
Template Conservation																																																																		.
Template Sequence		P	T	A	D	A	V	V	K	S	L	A	D	D	X	L	A	Y	S	Q	Q	G	Q	P	V	H	I	S	L	S	G	G	S	T	P	K	X	L	F	K	L	L	A	S	Q	P	Y	A	N	D	I	Q	W	K	N	L	H	F	W	W	G	D	E	R	C	.	V	A	P	D	D	A	E	S	N	Y	G	E	A	N	A
Template Known Secondary structure		S	S																	T	S	S	S									S											T	S	T	T					S		G	G	G						S				S	.	S		T	T	S	T	T
Template Predicted Secondary structure																																																																		.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.		.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
														173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.				.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	P	A	P	L	R	A	S	S	A	D	I	A	R	T	L	K	N	E	N	C	V	K	D	V	L	L	A	A	Q	A	.	.	.	A	D	V	A	I	V	G	I	G	A	V	S	Q	Q	D	D	A	T	I	I	R	S	G	Y	I	S	Q	G	E	Q	L	M	I	G	R
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.																															.	.	.	.	.
Template Conservation																																																																													.	.	.	.	.
Template Sequence		L	L	F	S	K	I	N	X	P	A	Q	N	I	H	R	I	L	G	E	N	E	P	Q	A	E	A	E	R	F	A	Q	A	X	A	H	V	I	P	T	E	N	G	T	P	V	F	D	W	I	L	L	G	V	G	A	D	G	H	T	A	S	L	F	P	G	Q	T	D	Y	A	D	A	N	L	S	.	.	.	.	.
Template Known Secondary structure			T	G	G	G	S				G	G	G	B					T	T	S																	S				T	T					S								T	T	S		B	T	T	B		T	T	T			T	T			S	S		.	.	.	.	.
Template Predicted Secondary structure																																																																													.	.	.	.	.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	G	A	V	G	D	I	L	G	Y	F	F	D	A	K	G	D	V	V	T	N	I	K	I	H	N	E	L	I	G	L	P	L	S	A	L	K	T	I	P	V	R	V	G	V	A	G	G	E	N	K	A	E	A	I	A	A	A	M	K	G	G
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	V	A	S	H	P	E	S	G	Q	L	R	V	S	K	T	A	K	V	L	Q	A	A	K	R	I	S	Y	L	V	L	G	A	G	K	A	E	I	V	E	Q	I	H	T	T	P
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						T	T	T															S	S								S	G	G	G										S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions