Job Description P76141 Confidence 96.77% Date Thu Jan 5 12:19:32 GMT 2012 Rank 91 Aligned Residues 118 % Identity 11% Template c1i1gA_ PDB info PDB header:transcription Chain: A: PDB Molecule:transcriptional regulator lrpa; PDBTitle: crystal structure of the lrp-like transcriptional regulator from the2 archaeon pyrococcus furiosus Resolution 2.90 Å

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		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.		.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure																																										.
Query SS confidence																																										.
Query Sequence		I	A	W	F	Y	Y	H	D	G	L	T	Q	S	E	I	S	D	R	L	G	L	T	R	L	K	V	S	R	L	L	E	K	G	H	Q	S	G	I	I	R	.	V	Q	I	N	S	R	F	E	G	C	L	E	Y	E	T	Q	L	R	R	Q	F	S	L	Q	H	V	R	V	I	P	G	L	A	D	A	D	V	G	G
Query Conservation																																										.
Alig confidence																																										.										.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																				.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	E	I	L	E	K	D	A	R	T	P	F	T	E	I	A	K	K	L	G	I	S	E	T	A	V	R	K	R	V	K	A	L	E	E	K	G	I	I	E	G	Y	T	I	K	I	N	P	K	K	.	.	.	.	.	.	.	.	.	.	.	L	G	Y	S	L	V	T	I	T	G	V	D	T	K	P	E	K	L	F
Template Known Secondary structure									T	T											T	S																T	S	S									S	G	G	.	.	.	.	.	.	.	.	.	.	.	G	T													G	G	G
Template Predicted Secondary structure																																																				.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.												60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		101	.	.	.	.	.	.	.						.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.		.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure										.	.	.	.	.																												.
Query SS confidence										.	.	.	.	.																												.
Query Sequence		R	L	G	I	G	A	A	H	.	.	.	.	.	M	L	M	S	L	L	Q	P	Q	Q	M	L	A	I	G	F	G	E	A	T	M	N	T	L	Q	R	L	.	S	G	F	I	S	S	Q	Q	I	R	L	V	T	L	S
Query Conservation										.	.	.	.	.																												.
Alig confidence										.	.	.	.	.																												.
Template Conservation
Template Sequence		E	V	A	E	K	L	K	E	Y	D	F	V	K	E	L	Y	L	S	S	G	D	H	M	I	M	A	V	I	W	A	K	D	G	E	D	L	A	E	I	I	S	N	K	I	G	K	I	E	G	V	T	K	V	C	P	A
Template Known Secondary structure										S	T	T								S	S	S	S	S								S	S											T	T	T	T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions