Return to main results Retrieve Phyre Job Id

Job DescriptionP76141
Confidence66.01%DateThu Jan 5 12:19:32 GMT 2012
Rank409Aligned Residues39
% Identity13%Templatec1dpuA_
PDB info PDB header:dna binding proteinChain: A: PDB Molecule:replication protein a (rpa32) c-terminal domain; PDBTitle: solution structure of the c-terminal domain of human rpa322 complexed with ung2(73-88)
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   28.30.........40 .........50.........60......
Predicted Secondary structure 



.







Query SS confidence 












.

























Query Sequence  HDGLTQSEISDRL. GLTRLKVSRLLEKGHQSGIIRVQINS
Query Conservation    
 

 


  
.



  




  

  


 
 
  
Alig confidence 












.

























Template Conservation    

 
 

   
       
  


 
  

 






Template Sequence  PEGLNFQDLKNQLKHMSVSSIKQAVDFLSNEGHIYSTVDD
Template Known Secondary structure  TTTSTTS
TTS
SST
Template Predicted Secondary structure 















Template SS confidence 







































   222.......230.........240.........250.........260.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions