|   |
8 | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | L | A | L | V | F | S | L | P | V | F | A | A | E | H | W | I | D | V | R | V | P | E | Q | Y | Q | Q | E | H | V | Q | G | A | I | N | I | P | L | K | E | V | K | E | R | I | A | T | A | V | P | D | K | N | D | T | V | K | V | Y | C | N | A | G | R | Q | S | G | Q | A | K | E | I | L | S | E | M | G | Y | T | H |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|   |   |   |
|
|   |   |
|
|
|   |
|
|   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |
|   |   |
|   |
|
|   |   |
|
|   |   |
|   |   |   |
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|   |   |   |
|   |   |   |
|
|
|
|
|
|   |   |
|
|   |   |
|
|   |   |   |   |   |   |
|   |   |
|   |   |   |   |
|
|
|   |
|   |
|   |   |
|
|   |   |   |
|   |   |
|   |   |   |
|   |   |
|
Template Sequence |   |
A | E | E | V | Q | A | L | L | D | A | R | A | E | A | V | I | L | D | A | R | R | F | D | E | Y | Q | T | X | S | I | P | G | G | I | S | V | P | G | A | E | L | V | L | R | V | A | E | L | A | P | D | P | R | T | R | V | I | V | N | C | A | G | R | T | R | S | I | I | G | T | Q | S | L | L | N | A | G | I | P | N |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |  |  |
| S |
|  |  |  |  |  |  | S | B |
| T | T |
|  |  |
|
| G | G | G |  |  |  |  |  |  |  |  |
|
| S | T | T | S |  |  |  |  |  |
| S | S | S |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| S | S |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
134 | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . |
  |
  |   |
|
88 | . | 90 | . | |
. | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
. |  |  |  |  | . |
|
|  |  |  |  |  |
|
Query SS confidence |   |
. |
|
|
|
| . |
|
|
|
|
|
|
|
|
Query Sequence |   |
. |
V | E | N | A | . |
G | G | L | K | D | I | A | M |
Query Conservation |   |
. |
|
|   |   | . |
|
|   |   |   |   |   |   |
Alig confidence |   |
. |
|
|
|
| . |
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |
|   |
|
|   |   |   |
|   |   |
Template Sequence |   |
P | V | A | A | L | R | N | G | T | I | G | W | T | L |
Template Known Secondary structure |   |
|  |  |  |  | T | T |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |
|
|
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
214 | . | . | . | . | . | 220 | . | . | . | . | . | . | . |
  |