Job Description P27835 Confidence 11.79% Date Thu Jan 5 11:44:12 GMT 2012 Rank 4 Aligned Residues 49 % Identity 22% Template c2vqzB_ PDB info PDB header:transcription Chain: B: PDB Molecule:polymerase basic protein 2; PDBTitle: structure of the cap-binding domain of influenza virus2 polymerase subunit pb2 with bound m7gtp Resolution 2.30 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
Predicted Secondary structure
Query SS confidence
Query Sequence		I	V	G	M	F	W	L	A	L	K	R	Y	G	M	N	V	S	G	D	E	A	F	Y	T	F	L	Y	L	T	R	D	T	F	S	P	W	E	N	L	A	L	L	L	Q	N	Y	D	N	I	D	F	Q	G	L
Query Conservation
Alig confidence																									.	.	.	.	.
Template Conservation																									.	.	.	.	.
Template Sequence		I	V	A	X	V	F	S	Q	E	D	C	X	I	K	A	V	R	G	D	L	N	F	V	.	.	.	.	.	A	N	Q	R	L	N	P	X	H	Q	L	L	R	H	F	Q	K	D	A	K	V	L	F	Q	N	W
Template Known Secondary structure									T						T	T			S						.	.	.	.	.																										S
Template Predicted Secondary structure																									.	.	.	.	.
Template SS confidence
		399	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.						.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions