Job Description P63228 Confidence 99.91% Date Thu Jan 5 12:07:58 GMT 2012 Rank 46 Aligned Residues 167 % Identity 23% Template d1ys9a1 SCOP info HAD-like HAD-like NagD-like Resolution 2.56

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70													.
Predicted Secondary structure																																																																					.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																					.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	V	P	A	I	F	L	D	R	D	G	T	I	N	V	D	H	G	Y	V	H	E	I	D	N	F	E	F	I	D	G	V	I	D	A	M	R	E	L	K	K	M	G	F	A	L	V	V	V	T	N	Q	S	G	I	A	R	G	K	F	T	E	A	Q	F	E	T	.	.	.	.	.	.	.	.	.	.	.	.	L
Query Conservation																																																																					.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.	.	.																																									.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																				.	.	.	.	.	.	.	.	.
Template Sequence		P	Y	K	G	Y	L	I	D	L	D	G	T	I	Y	Q	G	K	N	.	.	.	.	.	.	.	.	.	R	I	P	A	G	E	R	F	I	K	R	L	Q	E	R	G	I	P	Y	L	L	V	T	N	N	T	T	R	T	P	E	M	V	Q	S	M	L	A	N	Q	F	H	V	E	T	S	I	E	T	I	Y	T	A
Template Known Secondary structure				S						S	B	T	T	T			T	T		.	.	.	.	.	.	.	.	.															T	T											S	S													S	S					G	G	G
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.										20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	E	W	M	D	W	S	L	A	D	R	D	V	D	L	D	G	I	Y	Y	C	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	M	A	T	V	D	Y	M	N	D	M	N	R	G	K	T	A	Y	V	I	G	E	T	G	L	K	S	A	I	A	A	A	G	Y	V	E	E	L	E	N	P	A	Y	V	V	V	G	L	D	S	Q	V	T	Y	E	M	L	A	I	A	T	L	A	I	Q	K	G	A	L	F	I	G	T	N	P	D	L	N	I	P
Template Known Secondary structure													T			S						S											T	T					S	S	S		S								T	T															T	T						S				S
Template Predicted Secondary structure
Template SS confidence
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
													94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.		.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.																																													.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.																																													.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	H	H	P	Q	G	S	V	E	E	F	R	Q	V	C	D	C	R	K	P	H	P	G	M	L	L	S	A	R	D	Y	L	H	I	D	M	A	A	S	Y	M	V	G	D	K	.	L	E	D	M	Q	A	A	V	A	A	N	V	G	T	K	V	L	V	R	T	G	K	P	I
Query Conservation		.	.	.	.	.	.	.	.	.	.	.																																													.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.																																													.
Template Conservation
Template Sequence		T	E	R	G	L	M	P	G	A	G	A	L	N	A	L	L	E	A	A	T	R	V	K	P	V	F	I	G	K	P	N	A	I	I	M	N	K	S	L	E	V	L	G	I	Q	R	S	E	A	V	M	V	G	D	N	Y	L	T	D	I	M	A	G	I	Q	N	D	I	A	T	I	L	V	T	T	G	F	T	R	P
Template Known Secondary structure			S	S																		S							S	T	T	S												T	S		G	G	G						S		T	T	T							T	T	T							S	S	S	S	S		G
Template Predicted Secondary structure
Template SS confidence
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
		162	.	.	.	.	.	.			.	170	.	.	.	.	.	.	.	.	.
Predicted Secondary structure									.	.
Query SS confidence									.	.
Query Sequence		T	P	E	A	E	N	A	.	.	A	D	W	V	L	N	S	L	A	D	L
Query Conservation									.	.
Alig confidence									.	.
Template Conservation
Template Sequence		E	E	V	P	T	L	P	I	Q	P	D	H	V	L	S	S	L	D	E	W
Template Known Secondary structure		G	G	G	G	G		S	S			S				S		G	G	G
Template Predicted Secondary structure
Template SS confidence
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions