Return to main results Retrieve Phyre Job Id

Job DescriptionP63228
Confidence99.97%DateThu Jan 5 12:07:58 GMT 2012
Rank6Aligned Residues161
% Identity22%Templated1swva_
SCOP infoHAD-like HAD-like Phosphonoacetaldehyde hydrolase-like
Resolution2.30

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20......
Predicted Secondary structure 












.........................................................
Query SS confidence 






















. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Sequence  SVPAIFLDRDGTINVDHGYVHEI. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Conservation   






 



 
        .........................................................
Alig confidence 






















.........................................................
Template Conservation 







 



 
        
        
     
                                         
Template Sequence  KIEAVIFAWAGTTVDYGCFAPLEVFMEIFHKRGVAITAEEARKPMGLLKIDHVRALTEMPRIASEWNRVFRQLPTEADIQ
Template Known Secondary structure 



SBTTTBSTT

TTTTT



TTTTS
SSS


Template Predicted Secondary structure 





























Template SS confidence 















































































   5....10.........20.........30.........40.........50.........60.........70.........80....
 
   27..30.........40.........50.........60.........70.........80.........90.
Predicted Secondary structure  ...............













Query SS confidence  . . . . . . . . . . . . . . .
































































Query Sequence  . . . . . . . . . . . . . . . DNFEFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVDLDGIYY
Query Conservation  ...............          
 
  
        
                       
                
Alig confidence  ...............







































........................
Template Conservation                       


 
 
  
   
    
 
          
  ........................ 
Template Sequence  EMYEEFEEILFAILPRYASPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKE. . . . . . . . . . . . . . . . . . . . . . . . A
Template Known Secondary structure  GGGG

B
TTTT
B
SS
........................
Template Predicted Secondary structure 















........................
Template SS confidence 















































































   85....90.........100.........110.........120.........130......... 140
 
   92.......100.........110.........120...... ...130.........140.........150.........160...
Predicted Secondary structure 




















.












.......
Query SS confidence 


































.




































. . . . . . .
Query Sequence  CPHHPQGSVEEFRQVCDCRKPHPGMLLSARDYLHI. DMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITP. . . . . . .
Query Conservation        
  
         

 
            .     
 


   

  
  

  

 
         .......
Alig confidence 


































.




































.......
Template Conservation 

                 

 
               
    


   

  
  

   


  
             
Template Sequence  ALQGYKPDFLVTPDDVPAGRPYPWMCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVILGSSELGLTEEEVEN
Template Known Secondary structure  TT


S

B
GGGSS

TTSST

SGGGSSTTS
TT
TTT


Template Predicted Secondary structure 











































Template SS confidence 















































































   141........150.........160.........170.........180.........190.........200.........210.........220
 
   164.....170.........180........
Predicted Secondary structure  ................






Query SS confidence  . . . . . . . . . . . . . . . .
























Query Sequence  . . . . . . . . . . . . . . . . EAENAADWVLNSLADLPQAIKKQQK
Query Conservation  ................      
 

  
 

   
     
Alig confidence  ................
























Template Conservation                  
    

 

    

   
  
  
Template Sequence  MDSVELREKIEVVRNRFVENGAHFTIETMQELESVMEHIEK
Template Known Secondary structure  S
TT
SSSGGGT
Template Predicted Secondary structure 









Template SS confidence 








































   221........230.........240.........250.........260.
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions