Return to main results Retrieve Phyre Job Id

Job DescriptionP63228
Confidence99.14%DateThu Jan 5 12:07:58 GMT 2012
Rank102Aligned Residues171
% Identity25%Templated1rkqa_
SCOP infoHAD-like HAD-like Predicted hydrolases Cof
Resolution1.40

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.......
Predicted Secondary structure 


























.............
Query SS confidence 


































































. . . . . . . . . . . . .
Query Sequence  MAKSVPAIFLDRDGTINVDHGYVHEIDNFEFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQ. . . . . . . . . . . . .
Query Conservation 
   






 



 
                  
 
  
        
                .............
Alig confidence 
..

















........





































.............
Template Conservation 
.. 

 
  
 



     ........ 
       
  
   
      


                         
Template Sequence  L. . AIKLIAIDMDGTLLLPDH. . . . . . . . TISPAVKNAIAAARARGVNVVLTTGRPYAGVHNYLKELHMEQPGDYCITYN
Template Known Secondary structure 
..








S
TTS........


TT

SS
GGGTTT

STT
GG
Template Predicted Secondary structure 
..










........

















Template SS confidence 















































































   2 .......10.........20 .........30.........40.........50.........60.........70.
 
   68.70.........80.........90...
Predicted Secondary structure  ..................




....................................
Query SS confidence  . . . . . . . . . . . . . . . . . .

























. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Sequence  . . . . . . . . . . . . . . . . . . FETLTEWMDWSLADRDVDLDGIYYCP. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Conservation  ..................       
                  ....................................
Alig confidence  ..................

























....................................
Template Conservation                                                                                  
Template Sequence  GALVQKAADGSTVAQTALSYDDYRFLEKLSREVGSHFHALDRTTLYTANRDISYYTVHESFVATIPLVFCEAEKMDPNTQ
Template Known Secondary structure  GTTTT



B
T

SS


SS

TT



GGGS
TT

Template Predicted Secondary structure 



































Template SS confidence 















































































   72.......80.........90.........100.........110.........120.........130.........140.........150.
 
   94.....100.........110.........120.........130.........140......
Predicted Secondary structure  ...........................






















Query SS confidence  . . . . . . . . . . . . . . . . . . . . . . . . . . .




















































Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . HHPQGSVEEFRQVCDCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVA
Query Conservation  ...........................    
  
         

 
                 
 


   

  
  
Alig confidence  ...........................




















































Template Conservation                                                
                 
  


  

  

  
Template Sequence  FLKVMMIDEPAILDQAIARIPQEVKEKYTVLKSAPYFLEILDKRVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEY
Template Known Secondary structure  B


S
TTTT
ST

GGG
SGGG
Template Predicted Secondary structure 





















Template SS confidence 















































































   152.......160.........170.........180.........190.........200.........210.........220.........230.
 
   147..150.........160.........170........ .180......
Predicted Secondary structure 














..
Query SS confidence 































. .







Query Sequence  ANVGTKVLVRTGKPITPEAENAADWVLNSLAD. . LPQAIKKQ
Query Conservation 

  

 
               
 

  
 
..
   
   
Alig confidence 






.....



















..







Template Conservation 
   


..... 

    
  

 
       

   
   
Template Sequence  AGVGVAV. . . . . DNAIPSVKEVANFVTKSNLEDGVAFAIEKY
Template Known Secondary structure  SS
.....TTS

S


TTTT
Template Predicted Secondary structure 


.....











Template SS confidence 









































   232...... .240.........250.........260........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions