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Job DescriptionP63228
Confidence99.04%DateThu Jan 5 12:07:58 GMT 2012
Rank109Aligned Residues170
% Identity14%Templated1nf2a_
SCOP infoHAD-like HAD-like Predicted hydrolases Cof
Resolution2.20

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10.........20.........30.........40.........50.........60.......
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Query Sequence  VPAIFLDRDGTINVDHGYVHEIDNFEFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQ. . . . . . . . . . . . . . . . .
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Template Sequence  YRVFVFDLDGTLLNDNL. . . . . . . . EISEKDRRNIEKLSRKCY. VVFASGRMLVSTLNVEKKYFKRTFPTIAYNGAIVYL
Template Known Secondary structure  B





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TTS........


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   2.......10........ .20.........30...... ...40.........50.........60.........70..
 
   68.70.........80.........90...
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Query Sequence  . . . . . . . . . . . FETLTEWMDWSLADRDVDLDGIYYCP. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  PEEGVILNEKIPPEVAKDIIEYIKPLNVHWQAYIDDVLYSEKDNEEIKSYARHSNVDYRVEPNLSELVSKMGTTKLLLID
Template Known Secondary structure  TTT

B
GGG



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   73......80.........90.........100.........110.........120.........130.........140.........150..
 
   94.....100.........110.........120.........130.........140.........150....
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Query Sequence  . . . . . . . . . . . . . . . . . . . HHPQGSVEEFRQVCDCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVL
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Template Sequence  TPERLDELKEILSERFKDVVKVFKSFPTYLEIVPKNVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGL. RVAM
Template Known Secondary structure 
TTTSTT
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   153......160.........170.........180.........190.........200.........210.........220....... ..230.
 
   155....160.........170........ .180........
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Query Sequence  VRTGKPITPEAENAADWVLNSLAD. . LPQAIKKQQK
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Template Sequence  E. . . NAIEKVKEA. SDIVTLTNNDSGVSYVLERIST
Template Known Secondary structure  T...TS
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TTTTTTS
B
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   232 .......240. ........250.........260...
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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