Job Description P63228 Confidence 99.80% Date Thu Jan 5 12:07:58 GMT 2012 Rank 76 Aligned Residues 130 % Identity 28% Template c3zvmA_ PDB info PDB header:hydrolase/transferase/dna Chain: A: PDB Molecule:bifunctional polynucleotide phosphatase/kinase; PDBTitle: the structural basis for substrate recognition by mammalian2 polynucleotide kinase 3' phosphatase Resolution 2.00 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.				.	.	.	.	.	.	.	.	30	.	.		.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																		.	.	.												.
Query SS confidence																		.	.	.												.
Query Sequence		P	A	I	F	L	D	R	D	G	T	I	N	V	D	H	G	.	.	.	Y	V	H	E	I	D	N	F	E	F	I	.	D	G	V	I	D	A	M	R	E	L	K	K	M	G	F	A	L	V	V	V	T	N	Q	S	G	I	A	R	G	K	F	T	E	A	Q	F	E	T	L	T	E	W	M	D	W	S	L	A	D
Query Conservation																		.	.	.												.
Alig confidence																		.	.	.												.																																																.	.
Template Conservation																																																																																.	.
Template Sequence		K	V	A	A	F	D	L	D	G	T	L	I	T	T	R	S	G	K	V	F	P	T	S	P	S	D	W	R	I	L	Y	P	E	I	P	K	K	L	Q	E	L	A	A	E	G	Y	K	L	V	I	F	T	N	Q	M	G	I	G	R	G	K	L	P	A	E	V	F	K	G	K	V	E	A	V	L	E	K	L	.	.
Template Known Secondary structure		S						S	B	T	T	T				S	S			S	S		S	S	T	T					S		T	T											T	T														T	T	S	S																	.	.
Template Predicted Secondary structure																																																																																.	.
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.					.	.	.	.	130	.	.	.	.	.	.																		.	.	.	140
Predicted Secondary structure																																														.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																														.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	D	V	D	L	D	G	I	Y	Y	C	P	H	H	P	Q	G	S	V	E	E	F	R	Q	V	C	D	C	R	K	P	H	P	G	M	L	L	S	A	R	D	Y	L	H	.	.	.	.	I	D	M	A	A	S	Y	M	V	G	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	L	E	D
Query Conservation																																														.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	G	V	P	F	Q	V	L	V	A	T	H	A	G	L	N	R	K	P	V	S	G	M	W	D	H	L	Q	E	Q	A	N	E	G	I	P	I	S	V	E	D	S	V	F	V	G	D	A	A	G	R	L	A	N	W	A	P	G	R	K	K	K	D	F	S	C	A	D
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	T	S									S	S	S	T	T	S	T	T	S											S	S	T	T					S	T	T						S				B		T	T		B	T	T	B		S			S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
															243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
		141	.	.	.	.	.	.	.	.	150
Predicted Secondary structure
Query SS confidence
Query Sequence		M	Q	A	A	V	A	A	N	V	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	L	F	A	L	N	V	G	L	P
Template Known Secondary structure									T
Template Predicted Secondary structure
Template SS confidence
		310	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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