Job Description P63228 Confidence 99.90% Date Thu Jan 5 12:07:58 GMT 2012 Rank 52 Aligned Residues 147 % Identity 22% Template c2pkeA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:haloacid delahogenase-like family hydrolase; PDBTitle: crystal structure of haloacid delahogenase-like family hydrolase2 (np_639141.1) from xanthomonas campestris at 1.81 a resolution Resolution 1.81 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	S	V	P	A	I	F	L	D	R	D	G	T	I	N	V	D	H	G	Y	V	H	E	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	A	I	Q	L	V	G	F	D	G	D	D	T	L	W	K	S	E	D	Y	Y	R	T	A	E	A	D	F	E	A	I	L	S	G	Y	L	D	X	Q	Q	H	L	L	A	V	E	R	R	N	L	K	I	F	G	Y	G	A	K	G	X	T	L	S	X	I	E	T	A	I	E	L	T	E	A	R	I	E	A	R	D
Template Known Secondary structure			S									B	T	T	T	B																		T	T	T					T	T														S	S																T	T	T
Template Predicted Secondary structure
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
															27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	D	N	F	E	F	I	D	G	V	I	D	A	M	R	E	L	K	K	M	G	F	A	L	V	V	V	T	N	Q	S	G	I	A	R	G	K	F	T	E	A	Q	F	E	T	L	T	E	W	M	D	W	S	L	A	D	R	D	V	D	L	D	G	I	Y	Y	C	P
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																				.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																		.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	Q	R	I	V	E	I	G	R	A	T	L	Q	H	P	V	E	V	I	A	G	V	R	E	A	V	A	A	I	A	A	D	.	Y	A	V	V	L	I	T	K	G	D	L	F	H	Q	E	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	I	E	Q	S	G
Template Known Secondary structure														T					B		T	T										T	T	.	S								S								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						S
Template Predicted Secondary structure																																		.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.		.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.																										.	.	.	.	.	.
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.		.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure																																															.
Query SS confidence																																															.
Query Sequence		H	H	P	Q	G	S	V	E	E	F	R	Q	V	C	D	C	R	K	P	H	P	G	M	L	L	S	A	R	D	Y	L	H	I	D	M	A	A	S	Y	M	V	G	D	K	L	.	E	D	M	Q	A	A	V	A	A	N	V	G	T	K	V	L	V	R	T	G	K	P	I	T	P	E	A	E	N	A	A	D	W	V
Query Conservation																																															.
Alig confidence													.	.	.	.	.																														.																								.	.	.	.	.	.	.	.
Template Conservation													.	.	.	.	.																																																						.	.	.	.	.	.	.	.
Template Sequence		L	S	D	L	F	P	R	I	E	V	V	.	.	.	.	.	S	E	K	D	P	Q	T	Y	A	R	V	L	S	E	F	D	L	P	A	E	R	F	V	X	I	G	N	S	L	R	S	D	V	E	P	V	L	A	I	G	G	W	G	I	Y	T	P	Y	A	D	E	P	R	.	.	.	.	.	.	.	.	L	R	E
Template Known Secondary structure		G	G	G	T								.	.	.	.	.	S			S												T			G	G	G						S												T	T												T	T	.	.	.	.	.	.	.	.
Template Predicted Secondary structure													.	.	.	.	.																																																						.	.	.	.	.	.	.	.
Template SS confidence
		149	150	.	.	.	.	.	.	.	.	.						160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.									.	.	.
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	N	S	L	A	D	L	P	Q	A	I	K	K	Q	Q	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	P	D	P	S	G	W	P	A	A	V	R	A	L	D	A
Template Known Secondary structure			S	S	G	G	G
Template Predicted Secondary structure
Template SS confidence
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions